RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SERPINF2P08697 491 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ATP6V1B2P21281 511 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 GLRBP48167 497 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PURAQ00577 322 aaKnown RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 TOMM20Q15388 145 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 PDHXO00330 501 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 RAD51BO15315 384 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 EIF3HO15372 352 aaKnown RBP eCLIP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 RANBP1P43487 201 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CCT8P50990 548 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP24A1Q07973 514 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 GRIK4Q16099 956 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 MARC1Q5VT66 337 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 RNASE11Q8TAA1 199 aaKnown RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 OSMRQ99650 979 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 ATP13A1Q9HD20 1204 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 TSPAN3O60637 253 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 IGFBP4P22692 258 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 GRIK3Q13003 919 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM45BPQ6NSW5 357 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 TMEM154Q6P9G4 183 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 WDR36Q8NI36 951 aaKnown RBP16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM136AQ96C01 138 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 EPS8L2Q9H6S3 715 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 USP18Q9UMW8 372 aa16.13■□□□□ 0.17
NUCKS1-201ENST00000367142 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 JCHAINP01591 159 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 UQCRBP14927 111 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 ZNF7P17097 686 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 NPTX2P47972 431 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 CPA2P48052 419 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 RXRGP48443 463 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 CSHL1Q14406 222 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 METTL7BQ6UX53 244 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 IL17RAQ96F46 866 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 EPB41L4AQ9HCS5 686 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 ACOT9Q9Y305 439 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 MAGEB16A2A368 324 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 RAMP2O60895 175 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 POMCP01189 267 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 PTAR1Q7Z6K3 402 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 SNCAIPQ9Y6H5 919 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 PEX1O43933 1283 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 CTSEP14091 401 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 SLC2A4P14672 509 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 NUP107P57740 925 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 CYP20A1Q6UW02 462 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 BNC2Q6ZN30 1099 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 RGL4Q8IZJ4 473 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FDXACB1Q9BRP7 624 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 VTA1Q9NP79 307 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 CHORDC1Q9UHD1 332 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 MPOP05164 745 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 AKR1A1P14550 325 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 KLK7P49862 253 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 TAF13Q15543 124 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM171A1Q5VUB5 890 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 TMC2Q8TDI7 906 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 BBS4Q96RK4 519 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 EXO5Q9H790 373 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 PARVBQ9HBI1 364 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 POLE3Q9NRF9 147 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM25AB3EWG3 89 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM25CB3EWG5 89 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM25GB3EWG6 89 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM131BQ86XD5 332 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 GMCL1P1Q8NEA9 526 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 FAM45AQ8TCE6 357 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 KCTD14Q9BQ13 255 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 DCLK3Q9C098 648 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 RRAGCQ9HB90 399 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 AP4S1Q9Y587 144 aa16.12■□□□□ 0.17
NUCKS1-201ENST00000367142 HS6ST1O60243 411 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 TRIM13O60858 407 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 MFSD10Q14728 455 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 EPHX4Q8IUS5 362 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SMARCD1Q96GM5 515 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SERPINB11Q96P15 392 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SERHL2Q9H4I8 314 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 RERGLQ9H628 205 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 SERHLQ9NQF3 203 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 OR6A2O95222 327 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 POLR2EP19388 210 aaKnown RBP16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 OTUD4Q01804 1114 aaKnown RBP16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 KCNT1Q5JUK3 1230 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 DOK6Q6PKX4 331 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 FCGR1AP12314 374 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 AXLP30530 894 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 LAMTOR4Q0VGL1 99 aa16.11■□□□□ 0.17
NUCKS1-201ENST00000367142 NECAB2Q7Z6G3 386 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms