RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 PTGR1Q14914 329 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 TPH2Q8IWU9 490 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 ADGRF4Q8IZF3 695 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 JPH3Q8WXH2 748 aaPredicted RBP5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 LMLNQ96KR4 655 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 ZNF180Q9UJW8 692 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 ANAPC4Q9UJX5 808 aa5.29□□□□□ -1.56
RNU4-40P-201ENST00000364351 CAPN8A6NHC0 703 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 AKAP10O43572 662 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 UGDHO60701 494 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 MBPP02686 304 aaPredicted RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 TMIGD3P0DMS9 266 aaPredicted RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 ARRB2P32121 409 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 P2RX3P56373 397 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 KCNAB1Q14722 419 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 INPP5JQ15735 1006 aaPredicted RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 ZNF324BQ6AW86 544 aaPredicted RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 GRHL2Q6ISB3 625 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 SWSAP1Q6NVH7 229 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 RBM44Q6ZP01 1051 aaKnown RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 OVCH2Q7RTZ1 564 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 NMD3Q96D46 503 aaKnown RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 MEIS3Q99687 375 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 NTPCRQ9BSD7 190 aaKnown RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 C22orf23Q9BZE7 217 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 MYLK2Q9H1R3 596 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 MOV10Q9HCE1 1003 aaKnown RBP5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 DKK4Q9UBT3 224 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 VPS4AQ9UN37 437 aa5.28□□□□□ -1.56
RNU4-40P-201ENST00000364351 TRBV5-3A0A0A0MS03 114 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 CFAP69A5D8W1 941 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 IFITM10A6NMD0 228 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 FAM227AF5H4B4 570 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 HOXB2P14652 356 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 VPS41P49754 854 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 CAPRIN2Q6IMN6 1127 aaKnown RBP5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 YAF2Q8IY57 180 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 FBXL14Q8N1E6 418 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 FSTL5Q8N475 847 aaPredicted RBP5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 ARHGAP39Q9C0H5 1083 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 FAM83DQ9H4H8 585 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 SAP30LQ9HAJ7 183 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 PAPOLBQ9NRJ5 636 aaKnown RBP5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 AFF4Q9UHB7 1163 aaKnown RBP5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 ITGB1BP2Q9UKP3 347 aa5.27□□□□□ -1.57
RNU4-40P-201ENST00000364351 CTNND1O60716 968 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 TXNP10599 105 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 TBXAS1P24557 533 aaPredicted RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 RBL1P28749 1068 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 IDUAP35475 653 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 POLD2P49005 469 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 COPAP53621 1224 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 RPS16P62249 146 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 RAE1P78406 368 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 PIN1Q13526 163 aaPredicted RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 DNASE1L3Q13609 305 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 CLCA4Q14CN2 919 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 CNGA3Q16281 694 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 ODF3L2Q3SX64 289 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 UEVLDQ8IX04 471 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 MSI2Q96DH6 328 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 FAM84BQ96KN1 310 aaPredicted RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 CHST8Q9H2A9 424 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 DDX56Q9NY93 547 aaKnown RBP5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 SELENONQ9NZV5 590 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 TPCN1Q9ULQ1 816 aa5.26□□□□□ -1.57
RNU4-40P-201ENST00000364351 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 ISM1B1AKI9 464 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 TFEBP19484 476 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 BTF3P20290 206 aaKnown RBP5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 CNGA2Q16280 664 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 PLAG1Q6DJT9 500 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 APOA5Q6Q788 366 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 EPM2AIP1Q7L775 607 aaPredicted RBP5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 NUDCD2Q8WVJ2 157 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 NEUROG1Q92886 237 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 ATP2A3Q93084 1043 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 MIB2Q96AX9 1013 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 P2RY11Q96G91 374 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 RBM38Q9H0Z9 239 aaKnown RBP5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 VPS51Q9UID3 782 aa5.25□□□□□ -1.57
RNU4-40P-201ENST00000364351 TCF20Q9UGU0 1960 aaKnown RBP5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 ERVV-2B6SEH9 535 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 PRPF4O43172 522 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 HOXA11P31270 313 aaPredicted RBP5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 FHL3Q13643 280 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 NFATC4Q14934 902 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 CNN3Q15417 329 aaKnown RBP5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 MANEALQ5VSG8 457 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 MZT2AQ6P582 158 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
RNU4-40P-201ENST00000364351 IQCF1Q8N6M8 205 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms