RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PNPLA1Q8N8W4 532 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 SCAMP5Q8TAC9 235 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 STT3BQ8TCJ2 826 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 SLC22A17Q8WUG5 538 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 CCT6BQ92526 530 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 MMS19Q96T76 1030 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 ASIC5Q9NY37 505 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 SERGEFQ9UGK8 458 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 INSL6Q9Y581 213 aa4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 WDR33Q9C0J8 1336 aaKnown RBP4.95□□□□□ -1.62
RNU6-560P-201ENST00000364007 TARM1B6A8C7 271 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 M0QYT0 321 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 IPO5O00410 1097 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 RPP40O75818 363 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 EIF3JO75822 258 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 ACTL6BO94805 426 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 IGLV2-14P01704 120 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 APEHP13798 732 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 GPD1P21695 349 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 BMP5P22003 454 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 GRK6P43250 576 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 RENBPP51606 427 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 DGKQP52824 942 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 GPC5P78333 572 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 HOXA4Q00056 320 aaPredicted RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 CSHL1Q14406 222 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 POSTNQ15063 836 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 TIGD6Q17RP2 521 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 INO80DQ53TQ3 878 aaPredicted RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 KLHL17Q6TDP4 642 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 TTC30AQ86WT1 665 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 CLASRPQ8N2M8 674 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 C12orf76Q8N812 135 aaPredicted RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 ANKRD42Q8N9B4 389 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM71DQ8N9W8 422 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM98AQ8NCA5 519 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 EDC3Q96F86 508 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 KAZALD1Q96I82 304 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 EIF3CQ99613 913 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 HERPUD2Q9BSE4 406 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 AGO4Q9HCK5 861 aaKnown RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 SNX15Q9NRS6 342 aa4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 ARPP21Q9UBL0 812 aaPredicted RBP4.94□□□□□ -1.62
RNU6-560P-201ENST00000364007 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 TCRBV5S1A1TA0A578 114 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A18PA6NE21 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A16PA6NEW6 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A9PA6NNJ1 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A5PA8MXJ8 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 KIF28PB7ZC32 967 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 JTBO76095 146 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 NUDT3O95989 172 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 ITGA2BP08514 1039 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A15PP0C7V4 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FAM90A14PP0C7W9 464 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 TMIGD3P0DMS9 266 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 PEPDP12955 493 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 ZNF37AP17032 561 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 GALNSP34059 522 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 HMGA2P52926 109 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 TXNL4AP83876 142 aaKnown RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 CCDC15Q0P6D6 951 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FOXO1Q12778 655 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 GORABQ5T7V8 394 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 FBXO42Q6P3S6 717 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 C16orf89Q6UX73 402 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 TRIM72Q6ZMU5 477 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 ZNF804AQ7Z570 1209 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 CCDC117Q8IWD4 279 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 SUGP1Q8IWZ8 645 aaKnown RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 NRSN1Q8IZ57 195 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 NGDNQ8NEJ9 315 aaKnown RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 MAFAQ8NHW3 353 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 OTUD7AQ8TE49 926 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 TBC1D20Q96BZ9 403 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 DAZAP1Q96EP5 407 aaKnown RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 LTV1Q96GA3 475 aaPredicted RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 PAGR1Q9BTK6 254 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 MECRQ9BV79 373 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 MYLK2Q9H1R3 596 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 MYH16Q9H6N6 1097 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 RIOX1Q9H6W3 641 aa4.93□□□□□ -1.62
RNU6-560P-201ENST00000364007 LOC102724159A0A0B4J2E5 919 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 PLEKHD1A6NEE1 506 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 FYB1O15117 783 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 PPP6R2O75170 966 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 MT-CO3P00414 261 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 ATF7P17544 494 aaPredicted RBP4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 IGHMBP2P38935 993 aaKnown RBP4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 SOX10P56693 466 aa4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 RAE1P78406 368 aaKnown RBP4.92□□□□□ -1.62
RNU6-560P-201ENST00000364007 CFHR3Q02985 330 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms