RNA–Protein interactions for RNA: ENST00000362076.8

C1orf43-202, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-202ENST00000362076 CXCR3P49682 368 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 RABGGTBP53611 331 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ITGA8P53708 1063 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ROR1Q01973 937 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 NME3Q13232 169 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 MFSD5Q6N075 450 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 MON1AQ86VX9 555 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 CSPG4P5Q96PW8 444 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 KCTD15Q96SI1 283 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 CWH43Q9H720 699 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 PIGVQ9NUD9 493 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 DDIT4Q9NX09 232 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.6■□□□□ 0.258e-9■□□□□ 8.2
C1orf43-202ENST00000362076 SCML2Q9UQR0 700 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 DNALI1O14645 258 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 BAIAP3O94812 1187 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 RTN3O95197 1032 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 EFEMP2O95967 443 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 CPB1P15086 417 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 RAG1P15918 1043 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 PECAM1P16284 738 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 OAS2P29728 719 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ACTN2P35609 894 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 HCAR3P49019 387 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 CDR1P51861 262 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 LBX1P52954 281 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 PMS2P54278 862 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 DARS2Q6PI48 645 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 C4orf22Q6V702 233 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 SCAMP5Q8TAC9 235 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 UBLCP1Q8WVY7 318 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 IGSF21Q96ID5 467 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ZIM3Q96PE6 472 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 WDR6Q9NNW5 1121 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 IL37Q9NZH6 218 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 CALCOCO1Q9P1Z2 691 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 SAE1Q9UBE0 346 aaPredicted RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 TPX2Q9ULW0 747 aaKnown RBP16.6■□□□□ 0.25
C1orf43-202ENST00000362076 ATP8A1Q9Y2Q0 1164 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 BACE2Q9Y5Z0 518 aa16.6■□□□□ 0.25
C1orf43-202ENST00000362076 GOLGA8KD6RF30 607 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 H7C0C1 242 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 AGPSO00116 658 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 IFNB1P01574 187 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 ATP5OP48047 213 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 RPL10AP62906 217 aaKnown RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 PITX1P78337 314 aaPredicted RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 MORF4L2Q15014 288 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 P3H1Q32P28 736 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 IZUMO3Q5VZ72 239 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 PDZD4Q76G19 769 aaPredicted RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 TRMT10CQ7L0Y3 403 aaKnown RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 CROCCP2Q86T23 111 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 CMTR2Q8IYT2 770 aaKnown RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 ZNF689Q96CS4 500 aaPredicted RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 SPATA17Q96L03 361 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 SH3GL2Q99962 352 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 WDCPQ9H6R7 721 aa16.59■□□□□ 0.25
C1orf43-202ENST00000362076 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
C1orf43-202ENST00000362076 SYNJ2BP-COX16A0A087WUM0 186 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 BCLAF3A2AJT9 711 aaKnown RBP16.58■□□□□ 0.24
C1orf43-202ENST00000362076 NT5C1B-RDH14C9J2C7 533 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 VPS41P49754 854 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 PSEN1P49768 467 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 CBX1P83916 185 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 GPS1Q13098 491 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 BRMS1LQ5PSV4 323 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 RTP2Q5QGT7 225 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 CDKL3Q8IVW4 592 aaPredicted RBP16.58■□□□□ 0.24
C1orf43-202ENST00000362076 RNF168Q8IYW5 571 aaPredicted RBP16.58■□□□□ 0.24
C1orf43-202ENST00000362076 DQX1Q8TE96 717 aaKnown RBP16.58■□□□□ 0.24
C1orf43-202ENST00000362076 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 PIK3R5Q8WYR1 880 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 EDEM1Q92611 657 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 ZNF558Q96NG5 402 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 PRDM5Q9NQX1 630 aaPredicted RBP16.58■□□□□ 0.24
C1orf43-202ENST00000362076 COX16Q9P0S2 106 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 MTRRQ9UBK8 725 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 STK39Q9UEW8 545 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 SHOC2Q9UQ13 582 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 PLAAQ9Y263 795 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 RAD54BQ9Y620 910 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 BRCA2P51587 3418 aa16.58■□□□□ 0.24
C1orf43-202ENST00000362076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.57■□□□□ 0.24
C1orf43-202ENST00000362076 FAM92AA1XBS5 289 aa16.57■□□□□ 0.24
C1orf43-202ENST00000362076 MTMR11A4FU01 709 aa16.57■□□□□ 0.24
C1orf43-202ENST00000362076 TRIM43BA6NCK2 446 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms