RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CASP1P29466 404 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 DYRK1BQ9Y463 629 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 GH2P01242 217 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF846Q147U1 533 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 BICRALQ6AI39 1079 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 ELOA2Q8IYF1 753 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 SPPL2AQ8TCT8 520 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 SGF29Q96ES7 293 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 RNF145Q96MT1 663 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 KDM6AO15550 1401 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 ERVV-1B6SEH8 477 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 NR1D2Q14995 579 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 RNF149Q8NC42 400 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 MMP19Q99542 508 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 PDK2Q15119 407 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 CMTM6Q9NX76 183 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 DRG1Q9Y295 367 aaKnown RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 NUP153P49790 1475 aaKnown RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 NCF1BA6NI72 391 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 NCF1CA8MVU1 366 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 NCF1P14598 390 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-203ENST00000360280 CYP24A1Q07973 514 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 LRRC34Q8IZ02 419 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 CCDC3Q9BQI4 270 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 SNX9Q9Y5X1 595 aa9.54□□□□□ -0.88
VPS13A-203ENST00000360280 PRKAB2O43741 272 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PRKCBP05771 671 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 OTUD3Q5T2D3 398 aaPredicted RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SMYD1Q8NB12 490 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM237Q96Q45 408 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MCUBQ9NWR8 336 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 NDUFAF1Q9Y375 327 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ALOX5P09917 674 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 EPS8L3Q8TE67 593 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PROX1Q92786 737 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CHP1Q99653 195 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PLOD3O60568 738 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PRG2P13727 222 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SLC26A3P40879 764 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TOP3AQ13472 1001 aaPredicted RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SIX5Q8N196 739 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ACTRT2Q8TDY3 377 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 COA1Q9GZY4 146 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CORO2BQ9UQ03 480 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 AREL1O15033 823 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 OR52L1Q8NGH7 329 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SLC24A2Q9UI40 661 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 USP21Q9UK80 565 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 AP3D1O14617 1153 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 NCAM2O15394 837 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 RARGP13631 454 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ANKRD6Q9Y2G4 727 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MDM4O15151 490 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CPSF4O95639 269 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 RPS6KA3P51812 740 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PTGES3Q15185 160 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ARHGAP15Q53QZ3 475 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 FGD3Q5JSP0 725 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 STRA8Q7Z7C7 330 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MTA1Q13330 715 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 C8orf59Q8N0T1 100 aaPredicted RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 NRKQ7Z2Y5 1582 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CDHR2Q9BYE9 1310 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 EIF3MQ7L2H7 374 aaKnown RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SNAP91O60641 907 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 RHOBTB3O94955 611 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 DPYDQ12882 1025 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TTC23Q5W5X9 447 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM47Q9BQJ4 181 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF879B4DU55 563 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 LARGE1O95461 756 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 COMTP21964 271 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CAPGP40121 348 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 GSTM5P46439 218 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ALDH1A3P47895 512 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ALDH8A1Q9H2A2 487 aaPredicted RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 PTGES3LE9PB15 166 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 APOC1P02654 83 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ENO2P09104 434 aaPredicted RBP9.53□□□□□ -0.88
VPS13A-203ENST00000360280 CAMK1Q14012 370 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MFSD14CQ5VZR4 134 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 FEZF2Q8TBJ5 459 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 MYDGFQ969H8 173 aa9.53□□□□□ -0.88
VPS13A-203ENST00000360280 ASB2Q96Q27 587 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms