RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 PQLC3Q8N755 202 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 PIWIL2Q8TC59 973 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 GDPD5Q8WTR4 605 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 KCNN1Q92952 543 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 PAK5Q9P286 719 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 NR2E3Q9Y5X4 410 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 MAD1L1Q9Y6D9 718 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 LOC100653049A0A140TA62 436 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 FAM159BA6NKW6 160 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 CCNT2O60583 730 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 ZMPSTE24O75844 475 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 KRT34O76011 436 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 KRT38O76015 456 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 L1CAMP32004 1257 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 CDK18Q07002 472 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 MED21Q13503 144 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 SMAD1Q15797 465 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 TBCCQ15814 346 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 TCHHL1Q5QJ38 904 aaPredicted RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 FAM102AQ5T9C2 384 aaPredicted RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 LGSNQ5TDP6 509 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 HPS6Q86YV9 775 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
RPE-202ENST00000359429 SLC7A3Q8WY07 619 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 CENPKQ9BS16 269 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 PNPOQ9NVS9 261 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 WDR81Q562E7 1941 aa11.26□□□□□ -0.61
RPE-202ENST00000359429 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 BIRC5O15392 142 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PABPC4LP0CB38 370 aaKnown RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 CBLBQ13191 982 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 GRM2Q14416 872 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 CA9Q16790 459 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 ST13P4Q8IZP2 240 aaPredicted RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 UBA3Q8TBC4 463 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 NAT14Q8WUY8 206 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 KLHL4Q9C0H6 718 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 CDH22Q9UJ99 828 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 CPSF3Q9UKF6 684 aaKnown RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PCDHGB4Q9UN71 923 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 POMPQ9Y244 141 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PCDHGB5Q9Y5G0 923 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 ADCY6O43306 1168 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 MICAL2O94851 1124 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PGM3O95394 542 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PRKCGP05129 697 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 KRT19P08727 400 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PIM1P11309 404 aaPredicted RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 SLC1A6P48664 564 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 AP3M2P53677 418 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 BTKQ06187 659 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 TMEM192Q8IY95 271 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 PRPF31Q8WWY3 499 aaKnown RBP11.25□□□□□ -0.61
RPE-202ENST00000359429 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 SORT1Q99523 831 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 ADPGKQ9BRR6 497 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 CCDC28BQ9BUN5 200 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 ELOVL4Q9GZR5 314 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
RPE-202ENST00000359429 F5H423 210 aaPredicted RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 H3BNX3 289 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ZBED1O96006 694 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ALDOAP04075 364 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 RAG1P15918 1043 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 GPD2P43304 727 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 MAGEA3P43357 314 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 IDH3AP50213 366 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ZNF143P52747 638 aaPredicted RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 COPAP53621 1224 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 CRADDP78560 199 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 TRIP10Q15642 601 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 PABPC1LQ4VXU2 614 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 N4BP2L1Q5TBK1 243 aaPredicted RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 WDR78Q5VTH9 848 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 FRMD7Q6ZUT3 714 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ARCQ7LC44 396 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 WDR75Q8IWA0 830 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms