RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 ARHGAP17Q68EM7 881 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 NPNTQ6UXI9 565 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CAPN12Q6ZSI9 719 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 TMEM110Q86TL2 294 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 ANKMY2Q8IV38 441 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 FAM71DQ8N9W8 422 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 TEKT4Q8WW24 435 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 PITPNM3Q9BZ71 974 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 NXF3Q9H4D5 531 aaKnown RBP14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 MLXIPLQ9NP71 852 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 UBQLN1Q9UMX0 589 aaKnown RBP14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 CDY2AQ9Y6F7 541 aa14.85□□□□□ -0.03
NIPAL3-203ENST00000358028 VGLL3A8MV65 326 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 KRT15P19012 456 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 AXLP30530 894 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 SDC4P31431 198 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 RFC2P35250 354 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 GEMIN4P57678 1058 aaKnown RBP14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 SNX16P57768 344 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 GPX6P59796 221 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 NCALDP61601 193 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 MRPS6P82932 125 aaKnown RBP14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 PDK4Q16654 411 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 TCTN1Q2MV58 587 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 BOLA3Q53S33 107 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 FAM26DQ5JW98 314 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 FNBP1LQ5T0N5 605 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 DARS2Q6PI48 645 aaKnown RBP14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 RSPH3Q86UC2 560 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 OR6B3Q8NGW1 331 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 STK32AQ8WU08 396 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 APOL6Q9BWW8 343 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 TRIM6Q9C030 488 aaPredicted RBP14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 ECT2Q9H8V3 914 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 XPO7Q9UIA9 1087 aaKnown RBP14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 CDH23Q9H251 3354 aa14.84□□□□□ -0.03
NIPAL3-203ENST00000358028 CLUHO75153 1309 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 PAPSS1O43252 624 aaPredicted RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 TMEM63AO94886 807 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 ZWINTO95229 277 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 NQO1P15559 274 aaKnown RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 DESP17661 470 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 FOXN2P32314 431 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 ATP11AP98196 1134 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 SOWAHAQ2M3V2 549 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 PREPLQ4J6C6 727 aaPredicted RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 MSS51Q4VC12 460 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 SCYL2Q6P3W7 929 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 PSRC1Q6PGN9 363 aaPredicted RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 OTOP2Q7RTS6 562 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 ZDHHC17Q8IUH5 632 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 MAP7D3Q8IWC1 876 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 FAM172AQ8WUF8 416 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 KHSRPQ92945 711 aaKnown RBP eCLIP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 DHRS4Q9BTZ2 278 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 DPEP3Q9H4B8 488 aa14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.03
NIPAL3-203ENST00000358028 A0A0C4DFX4 3053 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 TCRBV7S3A2A0A539 114 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 A8MXQ7 604 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 H7C0C1 242 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 PIRO00625 290 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 GABBR2O75899 941 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ATP5HO75947 161 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ATP6V1G2O95670 118 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 CXCL10P02778 98 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ATP2A2P16615 1042 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 AKAP5P24588 427 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 STIP1P31948 543 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ATP5OP48047 213 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 BASP1P80723 227 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 RNASELQ05823 741 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ZKSCAN8Q15776 578 aaPredicted RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 WLSQ5T9L3 541 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 CGB2Q6NT52 195 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 C1orf228Q6PIY5 440 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 TAB3Q8N5C8 712 aaPredicted RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ALKBH8Q96BT7 664 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ZNF560Q96MR9 790 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 TBCBQ99426 244 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 NCAPGQ9BPX3 1015 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 LPIN3Q9BQK8 851 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 ACSS3Q9H6R3 686 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 PCDH18Q9HCL0 1135 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 GPATCH2LQ9NWQ4 482 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 RABGEF1Q9UJ41 708 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 PIN4Q9Y237 131 aaKnown RBP14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 TRPV2Q9Y5S1 764 aa14.83□□□□□ -0.04
NIPAL3-203ENST00000358028 APOL1O14791 398 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 TYROBPO43914 113 aa14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 PARNO95453 639 aaKnown RBP14.82□□□□□ -0.04
NIPAL3-203ENST00000358028 TGM2P21980 687 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms