RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 WASF2Q9Y6W5 498 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 STAU1O95793 577 aaKnown RBP18.32■□□□□ 0.52
RTN4-204ENST00000357732 CSH1P0DML2 217 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 CSH2P0DML3 217 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 NR2C2P49116 596 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 HIC1Q14526 733 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 KYAT1Q16773 422 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 THEMIS2Q5TEJ8 643 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.32■□□□□ 0.522e-32■□□□□ 11.2
RTN4-204ENST00000357732 RILPQ96NA2 401 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 THTPAQ9BU02 230 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 ASB7Q9H672 318 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 PCDH18Q9HCL0 1135 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 SMYD2Q9NRG4 433 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 GJA3Q9Y6H8 435 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 GLRA3O75311 464 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 MLNP12872 115 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 CPA2P48052 419 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 CDH8P55286 799 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 SNX16P57768 344 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 TNFAIP2Q03169 654 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 KDSRQ06136 332 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 MARK2Q7KZI7 788 aaKnown RBP18.31■□□□□ 0.52
RTN4-204ENST00000357732 PLPPR4Q7Z2D5 763 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 CCNJLQ8IV13 435 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 KBTBD2Q8IY47 623 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 ATP2A3Q93084 1043 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 FGD4Q96M96 766 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 TWNKQ96RR1 684 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 PCMTD2Q9NV79 361 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 MOCS1Q9NZB8 636 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 ITGA11Q9UKX5 1188 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
RTN4-204ENST00000357732 EME2A4GXA9 379 aaPredicted RBP18.31■□□□□ 0.52
RTN4-204ENST00000357732 LGR5O75473 907 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 ALDH1A2O94788 518 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 CPOXP36551 454 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 SH3BGRP55822 239 aaPredicted RBP18.31■□□□□ 0.52
RTN4-204ENST00000357732 RNF220Q5VTB9 566 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 STEAP4Q687X5 459 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 MTHFD1LQ6UB35 978 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 CDT1Q9H211 546 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 GBA2Q9HCG7 927 aaPredicted RBP18.31■□□□□ 0.52
RTN4-204ENST00000357732 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
RTN4-204ENST00000357732 PRR5-ARHGAP8B1AHC4 643 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 NFKBIEO00221 500 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CCNT2O60583 730 aaKnown RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 LYNP07948 512 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 SETSIPP0DME0 302 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 GRK2P25098 689 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 SLC26A2P50443 739 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 HIRAP54198 1017 aaPredicted RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 ARHGAP8P85298 464 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 IZUMO2Q6UXV1 221 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 EP400NLQ6ZTU2 488 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CXorf38Q8TB03 319 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 DEPDC1BQ8WUY9 529 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 HEXIM2Q96MH2 286 aaKnown RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 GBP5Q96PP8 586 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CPSF2Q9P2I0 782 aaKnown RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 HMX2A2RU54 273 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CXCL8P10145 99 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 ALDH18A1P54886 795 aaKnown RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 IRX4P78413 519 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 SEMA5AQ13591 1074 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 INSCQ1MX18 579 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CCDC14Q49A88 953 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 EFHC1Q5JVL4 640 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CES4AQ5XG92 561 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 OR6B2Q6IFH4 312 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 TRNP1Q6NT89 227 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 FAM183BPQ6ZVS7 135 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 ZNF534Q76KX8 674 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 NCAPG2Q86XI2 1143 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 ZDHHC17Q8IUH5 632 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 HACE1Q8IYU2 909 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 PCDH19Q8TAB3 1148 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 PPP1R14CQ8TAE6 165 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 CDKL2Q92772 493 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 ZBTB10Q96DT7 871 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 PPP1R12CQ9BZL4 782 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 PRDM16Q9HAZ2 1276 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 DCDC2Q9UHG0 476 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 GTF2IRD1Q9UHL9 959 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 APOBEC2Q9Y235 224 aaKnown RBP18.3■□□□□ 0.52
RTN4-204ENST00000357732 HEY1Q9Y5J3 304 aa18.3■□□□□ 0.52
RTN4-204ENST00000357732 ITGB3P05106 788 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 MCF2P10911 925 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 PIM1P11309 404 aaPredicted RBP18.29■□□□□ 0.52
RTN4-204ENST00000357732 L1CAMP32004 1257 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 POU5F1BQ06416 359 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 BMPR2Q13873 1038 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 RABGAP1LQ5R372 815 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 MBLAC2Q68D91 279 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 ADGRF2Q8IZF7 708 aa18.29■□□□□ 0.52
RTN4-204ENST00000357732 PRMT7Q9NVM4 692 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms