RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NWD1Q149M9 1564 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RASA1P20936 1047 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CES1P23141 567 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ERP29P30040 261 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ADSSP30520 456 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 FEZF2Q8TBJ5 459 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM161AQ9NX61 479 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GIN1Q9NXP7 522 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SCN3AQ9NY46 2000 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 LOC102724428A0A0B4J2F2 783 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PRMT5O14744 637 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TULP3O75386 442 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ENO3P13929 434 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GEMP55040 296 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SIK1P57059 783 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CDH18Q13634 790 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 LIN54Q6MZP7 749 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ZDHHC13Q8IUH4 622 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TMA16Q96EY4 203 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 DCUN1D1Q96GG9 259 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 DBR1Q9UK59 544 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ALKQ9UM73 1620 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CLIC2O15247 247 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GALNT18Q6P9A2 607 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 BHLHB9Q6PI77 547 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 DEFB107AQ8IZN7 70 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 DMGDHQ9UI17 866 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 STON1Q9Y6Q2 735 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 PIGBOS1A0A0B4J2F0 54 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 LARGE1O95461 756 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MARSP56192 900 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RNF219Q5W0B1 726 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ACAD10Q6JQN1 1059 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SLC9A9Q8IVB4 645 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 SPIRE2Q8WWL2 714 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM79Q9BSE2 394 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RABL2AQ9UBK7 228 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 RABL2BQ9UNT1 228 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GSTK1Q9Y2Q3 226 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 GLI1P08151 1106 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 IDO1P14902 403 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 ERVK-24P63145 666 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 CTTNQ14247 550 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TCF12Q99081 682 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MRPL57Q9BQC6 102 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 C17orf80Q9BSJ5 609 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 NYAP2Q9P242 653 aa6.75□□□□□ -1.33
VPS13B-202ENST00000357162 TRMT6Q9UJA5 497 aaKnown RBP6.75□□□□□ -1.33
VPS13B-202ENST00000357162 MEI4A8MW99 385 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 FARP2O94887 1054 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 UQCRBP14927 111 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 GRAPQ13588 217 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 GRAPLQ8TC17 118 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MYLPFQ96A32 169 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TMCO6Q96DC7 493 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 NDNQ99608 321 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MKS1Q9NXB0 559 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 LGALS13Q9UHV8 139 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TRIM49BA6NDI0 452 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PEX1O43933 1283 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM132DQ14C87 1099 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 HECTD3Q5T447 861 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RSBN1Q5VWQ0 802 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF746Q6NUN9 644 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PTF1AQ7RTS3 328 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MIER2Q8N344 545 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RALGAPA1Q6GYQ0 2036 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MYL12AP19105 171 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RCVRNP35243 200 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 MAGEA8P43361 318 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SLC26A2P50443 739 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 HM13Q8TCT9 377 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 PROX1Q92786 737 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TAS2R1Q9NYW7 299 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SALL1Q9NSC2 1324 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 RPL14P50914 215 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 IYDQ6PHW0 289 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 AGPAT5Q9NUQ2 364 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SNX13Q9Y5W8 968 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF701M0R085 212 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 DDX3XO00571 662 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CCNE2O96020 404 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TCF3P15923 654 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 NFKB1P19838 968 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 SP100P23497 879 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 HTR7P34969 479 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 TRAF3Q13114 568 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 FBXO43Q4G163 708 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 GSPT2Q8IYD1 628 aaKnown RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CHCHD4Q8N4Q1 142 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF420Q8TAQ5 688 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-202ENST00000357162 OMA1Q96E52 524 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 CHP1Q99653 195 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 VCLP18206 1134 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 GYG1P46976 350 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 STXBP2Q15833 593 aa6.74□□□□□ -1.33
VPS13B-202ENST00000357162 METTL3Q86U44 580 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms