RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KITP10721 976 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 CLK3P49761 638 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 THOP1P52888 689 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 MRPS9P82933 396 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 PPM1LQ5SGD2 360 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 KRT80Q6KB66 452 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 CRLF3Q8IUI8 442 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 LSMEM1Q8N8F7 131 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 TMA16Q96EY4 203 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 PLA2G12BQ9BX93 195 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 MYO3BQ8WXR4 1341 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 PRSS51A0A1B0GVH4 220 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 PDXKO00764 312 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 SCO2O43819 266 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 CALUO43852 315 aaPredicted RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 JRKO75564 520 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 NELFEP18615 380 aaKnown RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 IFNA8P32881 189 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 EIF2B5Q13144 721 aaKnown RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 KLHL38Q2WGJ6 581 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 TEX44Q53QW1 395 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ZNF618Q5T7W0 954 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 CES4AQ5XG92 561 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 GALNT18Q6P9A2 607 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ZFPM1Q8IX07 1006 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 TBCKQ8TEA7 893 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ATL1Q8WXF7 558 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ANO3Q9BYT9 981 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 SMARCAD1Q9H4L7 1026 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 XPNPEP1Q9NQW7 623 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 THAP1Q9NVV9 213 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 STK39Q9UEW8 545 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 PTBP2Q9UKA9 531 aaKnown RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 CLUHO75153 1309 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 BBOX1O75936 387 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 CASP4P49662 377 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 IST1P53990 364 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 MRPS22P82650 360 aaKnown RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 TMPRSS15P98073 1019 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 KLF1Q13351 362 aaPredicted RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 CDONQ4KMG0 1287 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 PPP4R4Q6NUP7 873 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ZNF354CQ86Y25 554 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 DCP2Q8IU60 420 aaKnown RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 TMEM102Q8N9M5 508 aaPredicted RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 ACSS3Q9H6R3 686 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 MARCOQ9UEW3 520 aaPredicted RBP16.23■□□□□ 0.19
RTN3-205ENST00000356000 TRAF6Q9Y4K3 522 aa16.23■□□□□ 0.19
RTN3-205ENST00000356000 C1orf232A0A0U1RR37 186 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 IDH3BO43837 385 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 GCATO75600 419 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 CYP1A2P05177 515 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 PRKCAP17252 672 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 EPHA3P29320 983 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 POLR2BP30876 1174 aaKnown RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 STAT3P40763 770 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 TFDP1Q14186 410 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 GPR107Q5VW38 600 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 OSTM1Q86WC4 334 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 SERAC1Q96JX3 654 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 UIMC1Q96RL1 719 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.22■□□□□ 0.19
RTN3-205ENST00000356000 HACD3Q9P035 362 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 DNMT3BQ9UBC3 853 aaKnown RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
RTN3-205ENST00000356000 ANGPTL3Q9Y5C1 460 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 ATRNL1Q5VV63 1379 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 M0QX08 132 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 ALX3O95076 343 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 NFATC3Q12968 1075 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 BOLA3Q53S33 107 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 CAVIN4Q5BKX8 364 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 AGMOQ6ZNB7 445 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 NATD1Q8N6N6 113 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 ANGPTL6Q8NI99 470 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 TFB1MQ8WVM0 346 aaKnown RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 CMTM5Q96DZ9 223 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 TCF12Q99081 682 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 C17orf80Q9BSJ5 609 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 NPLQ9BXD5 320 aaPredicted RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 ZNF395Q9H8N7 513 aaPredicted RBP16.22■□□□□ 0.19
RTN3-205ENST00000356000 ARMC1Q9NVT9 282 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 TMEM9Q9P0T7 183 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 GPSM3Q9Y4H4 160 aa16.22■□□□□ 0.19
RTN3-205ENST00000356000 GOLGA8MH3BSY2 632 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 FOXN3O00409 490 aaPredicted RBP16.21■□□□□ 0.19
RTN3-205ENST00000356000 NR3C1P04150 777 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 TGM1P22735 817 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 L1CAMP32004 1257 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ETV3P41162 512 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 PTK2BQ14289 1009 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 MORF4L2Q15014 288 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms