RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 GRIK1P39086 918 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 GBE1Q04446 702 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 CEP128Q6ZU80 1094 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 RELL1Q8IUW5 271 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 TAB3Q8N5C8 712 aaPredicted RBP26.66■■□□□ 1.86
CLK2-201ENST00000355560 PKNOX2Q96KN3 472 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 PPP1R12CQ9BZL4 782 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 ZCWPW1Q9H0M4 648 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 DDIT4Q9NX09 232 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 NINJ2Q9NZG7 142 aa26.66■■□□□ 1.86
CLK2-201ENST00000355560 RCOR3Q9P2K3 495 aaPredicted RBP26.66■■□□□ 1.86
CLK2-201ENST00000355560 SYN3O14994 580 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 SKIDA1Q1XH10 827 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 EFHC2Q5JST6 749 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 AGBL2Q5U5Z8 902 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 ANKRD33Q7Z3H0 272 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 PPIL6Q8IXY8 311 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 SCML4Q8N228 414 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 SCAMP5Q8TAC9 235 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 CPT1BQ92523 772 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 WDR6Q9NNW5 1121 aaKnown RBP26.65■■□□□ 1.86
CLK2-201ENST00000355560 ABI2Q9NYB9 513 aaPredicted RBP26.65■■□□□ 1.86
CLK2-201ENST00000355560 HCSTQ9UBK5 93 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.65■■□□□ 1.86
CLK2-201ENST00000355560 SMIM23A6NLE4 172 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 AMPD1P23109 780 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 VARS2Q5ST30 1063 aaKnown RBP26.65■■□□□ 1.86
CLK2-201ENST00000355560 BSPRYQ5W0U4 402 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 NCBP2-AS2Q69YL0 99 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 SLC39A5Q6ZMH5 540 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 RNF139Q8WU17 664 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 PGAP3Q96FM1 320 aaPredicted RBP26.65■■□□□ 1.86
CLK2-201ENST00000355560 C9orf72Q96LT7 481 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 SLC9A7Q96T83 725 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 USP29Q9HBJ7 922 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 RRN3Q9NYV6 651 aa26.65■■□□□ 1.86
CLK2-201ENST00000355560 KCNN4O15554 427 aa26.64■■□□□ 1.86
CLK2-201ENST00000355560 SLC5A3P53794 718 aa26.64■■□□□ 1.86
CLK2-201ENST00000355560 IFRD2Q12894 506 aaPredicted RBP26.64■■□□□ 1.86
CLK2-201ENST00000355560 CEP57Q86XR8 500 aa26.64■■□□□ 1.86
CLK2-201ENST00000355560 NPAS4Q8IUM7 802 aa26.64■■□□□ 1.86
CLK2-201ENST00000355560 DCP1BQ8IZD4 617 aaKnown RBP26.64■■□□□ 1.86
CLK2-201ENST00000355560 EPS8L3Q8TE67 593 aaKnown RBP26.64■■□□□ 1.86
CLK2-201ENST00000355560 TLDC2A0PJX2 215 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 CFAP69A5D8W1 941 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 RBL1P28749 1068 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 BASP1P80723 227 aaKnown RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 FAAP100Q0VG06 881 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 FAM171A1Q5VUB5 890 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 ANKRD22Q5VYY1 191 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 SAYSD1Q9NPB0 183 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 ARHGEF4Q9NR80 690 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 ETNK2Q9NVF9 386 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.63■■□□□ 1.854e-8■■■□□ 17.8
CLK2-201ENST00000355560 NOVA2Q9UNW9 492 aaKnown RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 COL4A4P53420 1690 aaPredicted RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 ZNF638Q14966 1978 aaKnown RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 BCLAF3A2AJT9 711 aaKnown RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 DCDC2CA8MYV0 355 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 GOLGA8MH3BSY2 632 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 HOXA2O43364 376 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 CREB3O43889 395 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 HPDP32754 393 aaPredicted RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 ACTN2P35609 894 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 MAGEA4P43358 317 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 NR2C2P49116 596 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 ATP1A2P50993 1020 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 AIF1P55008 147 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 SLC10A2Q12908 348 aaPredicted RBP26.63■■□□□ 1.85
CLK2-201ENST00000355560 KDM7AQ6ZMT4 941 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 CRIPAKQ8N1N5 446 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 NAT8LQ8N9F0 302 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 LRRN4Q8WUT4 740 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 NTAN1Q96AB6 310 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 TMEM109Q9BVC6 243 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 MFHAS1Q9Y4C4 1052 aa26.63■■□□□ 1.85
CLK2-201ENST00000355560 H3BRJ5 948 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 CAPN2P17655 700 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 ADRA1BP35368 520 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 TRIM60Q495X7 471 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 FAM43BQ6ZT52 329 aaPredicted RBP26.62■■□□□ 1.85
CLK2-201ENST00000355560 CROCCP2Q86T23 111 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 GPR62Q9BZJ7 368 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 MARCH5Q9NX47 278 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 CXCL10P02778 98 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 ALDH2P05091 517 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 SLCO1A2P46721 670 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 SLC11A1P49279 550 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 MNX1P50219 401 aaPredicted RBP26.62■■□□□ 1.85
CLK2-201ENST00000355560 DEFB128Q7Z7B8 93 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 CDKL3Q8IVW4 592 aaPredicted RBP26.62■■□□□ 1.85
CLK2-201ENST00000355560 SCN4BQ8IWT1 228 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 RTP4Q96DX8 246 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 B3GALT6Q96L58 329 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 COLEC11Q9BWP8 271 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 MRPL9Q9BYD2 267 aaKnown RBP26.62■■□□□ 1.85
CLK2-201ENST00000355560 ANLNQ9NQW6 1124 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 DTLQ9NZJ0 730 aa26.62■■□□□ 1.85
CLK2-201ENST00000355560 RASGRF2O14827 1237 aa26.61■■□□□ 1.85
CLK2-201ENST00000355560 F9P00740 461 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms