RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 NR6A1Q15406 480 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 BDH2Q9BUT1 245 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ENOPH1Q9UHY7 261 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 CNOT7Q9UIV1 285 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 AP4E1Q9UPM8 1137 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 GRK4P32298 578 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 MPP3Q13368 585 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 PLCL1Q15111 1095 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 USP49Q70CQ1 688 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ZCCHC7Q8N3Z6 543 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 GPRC5AQ8NFJ5 357 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RMND5BQ96G75 393 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 CEP44Q9C0F1 390 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 FOXN3O00409 490 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RASA1P20936 1047 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 SLC1A6P48664 564 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 EIF2B2P49770 351 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 ITGA1P56199 1179 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 WASHC2DQ5SRD0 308 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 HHIPL2Q6UWX4 724 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 SEPHS2Q99611 448 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 SLITRK2Q9H156 845 aa15.28■□□□□ 0.04
LMX1B-201ENST00000355497 RPRD1BQ9NQG5 326 aaKnown RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.28■□□□□ 0.04
LMX1B-201ENST00000355497 KRT6BP04259 564 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 STAG3L1P0CL83 205 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 CYP11B2P19099 503 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 KRT6CP48668 564 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 ERVK-24P63145 666 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 DHFR2Q86XF0 187 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 MIB1Q86YT6 1006 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 ADGRF2Q8IZF7 708 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
LMX1B-201ENST00000355497 MTMR12Q9C0I1 747 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 ACTR8Q9H981 624 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 SHROOM2Q13796 1616 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 C1orf232A0A0U1RR37 186 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 CCNT2O60583 730 aaKnown RBP15.27■□□□□ 0.04
LMX1B-201ENST00000355497 RHOCP08134 193 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 CYP11B1P15538 503 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 SKIV2L2P42285 1042 aaKnown RBP15.27■□□□□ 0.04
LMX1B-201ENST00000355497 BCAT1P54687 386 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 NFIXQ14938 502 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 R3HDM1Q15032 1099 aaKnown RBP15.27■□□□□ 0.04
LMX1B-201ENST00000355497 CBWD2Q8IUF1 395 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 NACC2Q96BF6 587 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 ZFRQ96KR1 1074 aaKnown RBP15.27■□□□□ 0.04
LMX1B-201ENST00000355497 AHSPQ9NZD4 102 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 USP18Q9UMW8 372 aa15.27■□□□□ 0.04
LMX1B-201ENST00000355497 MEI4A8MW99 385 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 ZC3H11AO75152 810 aaKnown RBP eCLIP15.27■□□□□ 0.03
LMX1B-201ENST00000355497 PRLRP16471 622 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 DGUOKQ16854 277 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 GLRA4Q5JXX5 417 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 IKBIPQ70UQ0 350 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 COMMD2Q86X83 199 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 SETD9Q8NE22 299 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 SPPL2AQ8TCT8 520 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CCDC3Q9BQI4 270 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 KIFC1Q9BW19 673 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 VTI1BQ9UEU0 232 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 H7C0S8 307 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 OGTO15294 1046 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CYP7B1O75881 506 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 IL6P05231 212 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 ZNF157P51786 506 aaPredicted RBP15.27■□□□□ 0.03
LMX1B-201ENST00000355497 MCL1Q07820 350 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CCDC153Q494R4 210 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 NSMCE2Q96MF7 247 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 ANKRD27Q96NW4 1050 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 TMEM121Q9BTD3 319 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 VPS28Q9UK41 221 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 ARIH1Q9Y4X5 557 aaPredicted RBP15.27■□□□□ 0.03
LMX1B-201ENST00000355497 PIK3CDO00329 1044 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CYB561D2O14569 222 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 KRT6AP02538 564 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 MGAT5Q09328 741 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 CROTQ9UKG9 612 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.03
LMX1B-201ENST00000355497 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 GPR182O15218 404 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ABCB1P08183 1280 aaPredicted RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 ALDH9A1P49189 494 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 STARD3Q14849 445 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TSC22D1Q15714 1073 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MPZL3Q6UWV2 235 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 RNASE11Q8TAA1 199 aaKnown RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 TCF7L2Q9NQB0 619 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 RABGEF1Q9UJ41 708 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 VANGL2Q9ULK5 521 aa15.26■□□□□ 0.03
LMX1B-201ENST00000355497 MAGEB16A2A368 324 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms