RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 POLD3Q15054 466 aaPredicted RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZNF57Q68EA5 555 aaPredicted RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 MRPL48Q96GC5 212 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 CYP4F12Q9HCS2 524 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ANKRD6Q9Y2G4 727 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TRDMT1O14717 391 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 BAIAP3O94812 1187 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 HK2P52789 917 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TSNQ15631 228 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 RGS18Q9NS28 235 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 DUSP12Q9UNI6 340 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 TPBGLP0DKB5 382 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 MZT2BQ6NZ67 158 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 MKL2Q9ULH7 1088 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 CD3EAPO15446 510 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 RAD17O75943 681 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 GJA8P48165 433 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 PDK4Q16654 411 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 KHDRBS2Q5VWX1 349 aaKnown RBP13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 AMER2Q8N7J2 671 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 ACTL9Q8TC94 416 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 GANCQ8TET4 914 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 SYTL2Q9HCH5 934 aa13.06□□□□□ -0.32
SYNCRIP-201ENST00000355238 LRRC10BA6NIK2 292 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 GPSM2P81274 684 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 BNC1Q01954 994 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ACCSLQ4AC99 568 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPATA2LQ8IUW3 424 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZNF668Q96K58 619 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 RERGLQ9H628 205 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CRNNQ9UBG3 495 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SPASTQ9UBP0 616 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 KIAA1257Q9ULG3 409 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 HS6ST1O60243 411 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 VPS26AO75436 327 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 VIL1P09327 827 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 PLIN5Q00G26 463 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 MXRA8Q9BRK3 442 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 AVENQ9NQS1 362 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ARHGEF3Q9NR81 526 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 AFF2P51816 1311 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 PTGES3LE9PB15 166 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 VPS4BO75351 444 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 POU1F1P28069 291 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CASP4P49662 377 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■□□□ 12
SYNCRIP-201ENST00000355238 RNF145Q96MT1 663 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 OSBPL11Q9BXB4 747 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 PDE2AO00408 941 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 APBA3O96018 575 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 IL6P05231 212 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 MYL3P08590 195 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CCNA2P20248 432 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 NRF1Q16656 503 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZRANB3Q5FWF4 1079 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TTC23Q5W5X9 447 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC20A1Q8WUM9 679 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SEMA6AQ9H2E6 1030 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 WDR41Q9HAD4 459 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SLC37A4O43826 429 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TFRCP02786 760 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ABHD2P08910 425 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ADSSP30520 456 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 GRIK1P39086 918 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 TAF5Q15542 800 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CYP4Z2PQ8N1L4 340 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 FBXL16Q8N461 479 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 CPNE1Q99829 537 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 NUDT12Q9BQG2 462 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 DGCR6LQ9BY27 220 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 ZSCAN32Q9NX65 697 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
SYNCRIP-201ENST00000355238 SNAP91O60641 907 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 SEC24AO95486 1093 aa13.04□□□□□ -0.32
SYNCRIP-201ENST00000355238 MSH3P20585 1137 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms