RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DEUP1Q05D60 604 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 PAN2Q504Q3 1202 aaKnown RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 NCBP2-AS2Q69YL0 99 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 MSANTD2Q6P1R3 559 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 FBXO46Q6PJ61 603 aaPredicted RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 BZW1Q7L1Q6 419 aaKnown RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 GSTA5Q7RTV2 222 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 RIN2Q8WYP3 895 aaPredicted RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 NDRG1Q92597 394 aaKnown RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 PRCCQ92733 491 aaPredicted RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ARL8AQ96BM9 186 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 PGM2Q96G03 612 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 SPATA17Q96L03 361 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 QKIQ96PU8 341 aaKnown RBP eCLIP17.88■□□□□ 0.455e-7■■■■□ 26.2
VPS13B-201ENST00000355155 PIGVQ9NUD9 493 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ARHGEF38Q9NXL2 777 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 TADA2AO75478 443 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 USP17L7P0C7H9 530 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 RPL22P35268 128 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 CHKAP35790 457 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 NRG1Q02297 640 aaPredicted RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 RNASELQ05823 741 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 PKN2Q16513 984 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 CDKL3Q8IVW4 592 aaPredicted RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 UNC45BQ8IWX7 931 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 HASPINQ8TF76 798 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 UBLCP1Q8WVY7 318 aaPredicted RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 OSBPL2Q9H1P3 480 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 GPATCH2LQ9NWQ4 482 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 ADAM21Q9UKJ8 722 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 LRFN2Q9ULH4 789 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 H3BRJ5 948 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 H7C4K7 107 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 M0QYT0 321 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 PQBP1O60828 265 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 GJA8P48165 433 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 BCAR1P56945 870 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 ZNF280DQ6N043 979 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 PPIL6Q8IXY8 311 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 FAM149B1Q96BN6 582 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 TLCD1Q96CP7 247 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 FAM118BQ9BPY3 351 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 FRMD8Q9BZ67 464 aaPredicted RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 CDC42EP4Q9H3Q1 356 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 SEMA4AQ9H3S1 761 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 RC3H2Q9HBD1 1191 aaKnown RBP17.87■□□□□ 0.45
VPS13B-201ENST00000355155 ABCC13Q9NSE7 274 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 HSFX1Q9UBD0 423 aa17.87■□□□□ 0.45
VPS13B-201ENST00000355155 A6NNZ2 444 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 DCLK1O15075 740 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TTC4O95801 387 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 GDF10P55107 478 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 PITX1P78337 314 aaPredicted RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TLE2Q04725 743 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TUBB8Q3ZCM7 444 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TRIM60Q495X7 471 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 ARTNQ5T4W7 220 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 DENND2CQ68D51 928 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 CTU1Q7Z7A3 348 aaKnown RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 ZNF276Q8N554 614 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 SMOC2Q9H3U7 446 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 ZMYND8Q9ULU4 1186 aaPredicted RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 GCATO75600 419 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 HOXC13P31276 330 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 BRMS1LQ5PSV4 323 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 BSPRYQ5W0U4 402 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 FUT10Q6P4F1 479 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 HAUS1Q96CS2 278 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 TTC25Q96NG3 672 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 RHOBTB2Q9BYZ6 727 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 DHX35Q9H5Z1 703 aaKnown RBP17.86■□□□□ 0.45
VPS13B-201ENST00000355155 VPS18Q9P253 973 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 PAK5Q9P286 719 aa17.86■□□□□ 0.45
VPS13B-201ENST00000355155 SGK1O00141 431 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 ALOX15BO15296 676 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 SHOX2O60902 331 aaPredicted RBP17.85■□□□□ 0.45
VPS13B-201ENST00000355155 GPS1Q13098 491 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 GPR17Q13304 367 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 SLC45A4Q5BKX6 768 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 NPNTQ6UXI9 565 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 ARHGAP18Q8N392 663 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 RNF139Q8WU17 664 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 RSAD2Q8WXG1 361 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 CPT1BQ92523 772 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 CWH43Q9H720 699 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 ARHGEF4Q9NR80 690 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 SAE1Q9UBE0 346 aaPredicted RBP17.85■□□□□ 0.45
VPS13B-201ENST00000355155 PCDHB5Q9Y5E4 795 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 BACE2Q9Y5Z0 518 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 GOLGA6CA6NDK9 693 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 C5orf60A6NFR6 353 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 CHADO15335 359 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 GOLGA6DP0CG33 693 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 ARL4AP40617 200 aa17.85■□□□□ 0.45
VPS13B-201ENST00000355155 SLC5A3P53794 718 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms