RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PLLPQ9Y342 182 aa20.26■□□□□ 0.83
COL13A1-201ENST00000354547 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SPAG6O75602 509 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 RFPL1O75677 317 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 PDHA1P08559 390 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 GNAZP19086 355 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 C16orf46Q6P387 395 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 CHSY1Q86X52 802 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 FAM131BQ86XD5 332 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 CCDC185Q8N715 623 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 OPTNQ96CV9 577 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 NAF1Q96HR8 494 aaKnown RBP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 PGLYRP2Q96PD5 576 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 LGMNQ99538 433 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 EIF2AQ9BY44 585 aaKnown RBP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 KLK14Q9P0G3 267 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 GSC2O15499 205 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 TSHRP16473 764 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 AKAP5P24588 427 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SESN2P58004 480 aaPredicted RBP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 KDSRQ06136 332 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 LGSNQ5TDP6 509 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SLC9A4Q6AI14 798 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 MTHFD1LQ6UB35 978 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 C4orf50Q6ZRC1 276 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 SKA1Q96BD8 255 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 PTCD3Q96EY7 689 aaKnown RBP20.25■□□□□ 0.83
COL13A1-201ENST00000354547 TAS2R1Q9NYW7 299 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 CNTN3Q9P232 1028 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 AP4E1Q9UPM8 1137 aa20.25■□□□□ 0.83
COL13A1-201ENST00000354547 H3BRB1 525 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 FBXO27Q8NI29 283 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 SLC35F5Q8WV83 523 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 RILPQ96NA2 401 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 C2CD2Q9Y426 696 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 BCLAF3A2AJT9 711 aaKnown RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 WDR27A2RRH5 827 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 KRT36O76013 467 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 GOT1P17174 413 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 LMO2P25791 158 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 L1CAMP32004 1257 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 FAM187BQ17R55 369 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 ZNF618Q5T7W0 954 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 FAM149B1Q96BN6 582 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 NFKBIZQ9BYH8 718 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 C20orf27Q9GZN8 174 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 SETD4Q9NVD3 440 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 LNPEPQ9UIQ6 1025 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 H3BRJ5 948 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 TRAFD1O14545 582 aaPredicted RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 KRT38O76015 456 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 F7P08709 466 aaPredicted RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 DESP17661 470 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 ADORA2AP29274 412 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 GMPRP36959 345 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 ALDH18A1P54886 795 aaKnown RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 CRYMQ14894 314 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 RCN1Q15293 331 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 HEATR6Q6AI08 1181 aaKnown RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 PPP1R14CQ8TAE6 165 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 SIGLEC10Q96LC7 697 aa20.24■□□□□ 0.83
COL13A1-201ENST00000354547 MAGED2Q9UNF1 606 aaPredicted RBP20.24■□□□□ 0.83
COL13A1-201ENST00000354547 AQP5P55064 265 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 ZNF534Q76KX8 674 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 WDR60Q8WVS4 1066 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 CDHR5Q9HBB8 845 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 KIAA1257Q9ULG3 409 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 WASHC2DQ5SRD0 308 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 CES3Q6UWW8 571 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 CDKL3Q8IVW4 592 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-201ENST00000354547 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 KCTD15Q96SI1 283 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-201ENST00000354547 SLC4A5Q9BY07 1137 aa20.23■□□□□ 0.83
COL13A1-201ENST00000354547 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.23■□□□□ 0.83
COL13A1-201ENST00000354547 CITO14578 2027 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 HMX2A2RU54 273 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 B2RBV5 119 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 ABL2P42684 1182 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 SLC8A3P57103 927 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 CATSPER4Q7RTX7 472 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 TMEM110Q86TL2 294 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 EBNA1BP2Q99848 306 aaKnown RBP20.22■□□□□ 0.83
COL13A1-201ENST00000354547 GRIK4Q16099 956 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 ACSBG2Q5FVE4 666 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 TREML1Q86YW5 311 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 PDCD7Q8N8D1 485 aaKnown RBP20.22■□□□□ 0.83
COL13A1-201ENST00000354547 MAB21L3Q8N8X9 362 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 GSDMBQ8TAX9 411 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 CSPG4P5Q96PW8 444 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 ZNF670Q9BS34 389 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 GOLGA2P5Q9HBQ8 144 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 PNPLA8Q9NP80 782 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 LOC285556D6RIA3 1793 aa20.22■□□□□ 0.83
COL13A1-201ENST00000354547 ASB14A6NK59 587 aa20.21■□□□□ 0.83
COL13A1-201ENST00000354547 PRKCHP24723 683 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 546.3 ms