RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 MARK4Q96L34 752 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 TBCDQ9BTW9 1192 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 NIF3L1Q9GZT8 377 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 VTA1Q9NP79 307 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 RPRD1BQ9NQG5 326 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 TBC1D23Q9NUY8 699 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CRB1P82279 1406 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 H3BN98 237 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CALCAP01258 141 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CYP24A1Q07973 514 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CSTF3Q12996 717 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 JSRP1Q96MG2 331 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 EMILIN2Q9BXX0 1053 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 AVENQ9NQS1 362 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 PDXKO00764 312 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 BUD23O43709 281 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 GLP2RO95838 553 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 FGFR3P22607 806 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 LAMB3Q13751 1172 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 RCN1Q15293 331 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 STOX1Q6ZVD7 989 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 GUF1Q8N442 669 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 NARS2Q96I59 477 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SIKE1Q9BRV8 207 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ADGRE3Q9BY15 652 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 PRRG4Q9BZD6 226 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ACTR8Q9H981 624 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 DNAJC16Q9Y2G8 782 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ANXA9O76027 345 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 IL1R1P14778 569 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 IL5RAQ01344 420 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 CYP4Z1Q86W10 505 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 ARID3BQ8IVW6 561 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 EXOC2Q96KP1 924 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 RBBP8Q99708 897 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 KCTD14Q9BQ13 255 aaPredicted RBP10.26□□□□□ -0.77
COL11A1-201ENST00000353414 NMRK1Q9NWW6 199 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 SNCAIPQ9Y6H5 919 aa10.26□□□□□ -0.77
COL11A1-201ENST00000353414 OPLAHO14841 1288 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 FGRP09769 529 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 BDNFP23560 247 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 PSMA3P25788 255 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CTNNB1P35222 781 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 OTUD4Q01804 1114 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 SCRN3Q0VDG4 424 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ZNF618Q5T7W0 954 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 MRNIPQ6NTE8 343 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 TDRD5Q8NAT2 981 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ELOVL6Q9H5J4 265 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CNGB3Q9NQW8 809 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 AKAP7Q9P0M2 348 aaPredicted RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 AMHP03971 560 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 MAPK11Q15759 364 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ATP6AP1LQ52LC2 224 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 OTUD3Q5T2D3 398 aaPredicted RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CMTM5Q96DZ9 223 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 NLNQ9BYT8 704 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 TRIM9Q9C026 710 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 RMND5AQ9H871 391 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 RSAD1Q9HA92 442 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 PXMP2Q9NR77 195 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 TNFSF13BQ9Y275 285 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 PSMA4P25789 261 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 NDUFV1P49821 464 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CCT8P50990 548 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 GEMP55040 296 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 NCF4Q15080 339 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 RNFT2Q96EX2 444 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 UBXN6Q9BZV1 441 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 MROH8Q9H579 483 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 GRID1Q9ULK0 1009 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 PDS5AQ29RF7 1337 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 TMEM191CA6NGB0 347 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 PSMD11O00231 422 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CNPP09543 421 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 POLR2EP19388 210 aaKnown RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CDH8P55286 799 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 C19orf18Q8NEA5 215 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 S100A13Q99584 98 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 MSRAQ9UJ68 235 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 OR6B1O95007 311 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 THOP1P52888 689 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ZNF57Q68EA5 555 aaPredicted RBP10.25□□□□□ -0.77
COL11A1-201ENST00000353414 USP49Q70CQ1 688 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 RASAL3Q86YV0 1011 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 FAM20CQ8IXL6 584 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 FBXO36Q8NEA4 188 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ABCG4Q9H172 646 aa10.25□□□□□ -0.77
COL11A1-201ENST00000353414 ANAPC2Q9UJX6 822 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms