RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PCDHB4Q9Y5E5 795 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 ALG6Q9Y672 507 aa8.65□□□□□ -1.02
CD44-205ENST00000352818 DOPEY2Q9Y3R5 2298 aa8.65□□□□□ -1.03
CD44-205ENST00000352818 CREBBPQ92793 2442 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 UPK3BL1B0FP48 263 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 UPK3BL2E5RIL1 263 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 B4GALT5O43286 388 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CSDE1O75534 798 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 WISP1O95388 367 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 STAU1O95793 577 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 TMEM191BP0C7N4 346 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 MYBL2P10244 700 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 HARSP12081 509 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 ITPKBP27987 946 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 GNA15P30679 374 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 ATICP31939 592 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CDH5P33151 784 aaPredicted RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 MAN1A1P33908 653 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 SLC1A1P43005 524 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 NSFP46459 744 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 GLUD2P49448 558 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CFHR1Q03591 330 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 TRPC3Q13507 836 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CUL1Q13616 776 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CCINQ13939 588 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 DCAF4L1Q3SXM0 396 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 COLEC12Q5KU26 742 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 DCAF12L1Q5VU92 463 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 EEF1DP3Q658K8 133 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 SPOPLQ6IQ16 392 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 APBB1IPQ7Z5R6 666 aaPredicted RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 MARCH9Q86YJ5 346 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 MREGQ8N565 214 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 ZNF513Q8N8E2 541 aaPredicted RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 SEC14L1Q92503 715 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 RUNDC3BQ96NL0 473 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 ZNF518BQ9C0D4 1074 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 XYLT2Q9H1B5 865 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 BRD9Q9H8M2 597 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 RPF1Q9H9Y2 349 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 ACP6Q9NPH0 428 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 MED4Q9NPJ6 270 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 CNOT8Q9UFF9 292 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 HPCAL4Q9UM19 191 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 AKT3Q9Y243 479 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 C2CD2Q9Y426 696 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
CD44-205ENST00000352818 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
CD44-205ENST00000352818 LRRK2Q5S007 2527 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 C2CD3Q4AC94 2353 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 A0A087WZ62 844 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 GOLGA6L10A0A0M3HER8 536 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CARNS1A5YM72 827 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 KRIT1O00522 736 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 RAD51CO43502 376 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 TSPAN1O60635 241 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 HEXIM1O94992 359 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 GLI1P08151 1106 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CXCL8P10145 99 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CEBPBP17676 345 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 COMTP21964 271 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 EIF4BP23588 611 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 ASPAP45381 313 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PEX5P50542 639 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 DNA2P51530 1060 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 MYL6P60660 151 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 RNASELQ05823 741 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 PTP4A2Q12974 167 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 DHX34Q14147 1143 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 ZNF423Q2M1K9 1284 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 ZNF699Q32M78 642 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 FAM78AQ5JUQ0 283 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 LIN9Q5TKA1 542 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PLEKHA7Q6IQ23 1121 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 GLB1LQ6UWU2 654 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 VITQ6UXI7 678 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 AGMOQ6ZNB7 445 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 MAATS1Q7Z4T9 603 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 TTC39CQ8N584 583 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PNPLA1Q8N8W4 532 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CCDC26Q8TAB7 109 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PIP4K2CQ8TBX8 421 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 FAM71BQ8TC56 605 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 SPATA18Q8TC71 538 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 ADAMTS14Q8WXS8 1223 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 ALG3Q92685 438 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 KRT12Q99456 494 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 FDXACB1Q9BRP7 624 aaPredicted RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 SEMA4CQ9C0C4 833 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms