RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SGSM3Q96HU1 749 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 POPDC2Q9HBU9 364 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 ETNK2Q9NVF9 386 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 USP3Q9Y6I4 520 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 CASP8AP2Q9UKL3 1982 aa17.32■□□□□ 0.36
SAMM50-201ENST00000350028 FOXO6A8MYZ6 492 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 H3BRJ5 948 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 GCATO75600 419 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 KRT15P19012 456 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 AMPD1P23109 780 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 CCND3P30281 292 aaPredicted RBP17.31■□□□□ 0.36
SAMM50-201ENST00000350028 NDUFV1P49821 464 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 GBE1Q04446 702 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 IFT88Q13099 833 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 MPP2Q14168 576 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 UPP1Q16831 310 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 FAM26DQ5JW98 314 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 FAM131BQ86XD5 332 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 CCDC197Q8NCU1 140 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 FBF1Q8TES7 1133 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 QKIQ96PU8 341 aaKnown RBP eCLIP17.31■□□□□ 0.36
SAMM50-201ENST00000350028 SLC9A7Q96T83 725 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 SMOQ99835 787 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 WDR83Q9BRX9 315 aaKnown RBP17.31■□□□□ 0.36
SAMM50-201ENST00000350028 TRABDQ9H4I3 376 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 CNGB3Q9NQW8 809 aa17.31■□□□□ 0.36
SAMM50-201ENST00000350028 SMG5Q9UPR3 1016 aaKnown RBP17.31■□□□□ 0.36
SAMM50-201ENST00000350028 A0A0U1RQF3 1178 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 FAM47DPA6NHR8 397 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 C9IYK1 514 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 M0QYT0 321 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 PRPF4O43172 522 aaKnown RBP eCLIP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 GHRP10912 638 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ODC1P11926 461 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 STX2P32856 288 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ELK3P41970 407 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MAGEA9P43362 315 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 AIF1P55008 147 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 DAOAP59103 153 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 DEUP1Q05D60 604 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 SLC10A2Q12908 348 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 LRRC14Q15048 493 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 PKN2Q16513 984 aaKnown RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 TIGD5Q53EQ6 642 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 RAB41Q5JT25 222 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 OTUD1Q5VV17 481 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ADGRD1Q6QNK2 874 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 TAX1BP1Q86VP1 789 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 METTL23Q86XA0 190 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 C3orf58Q8NDZ4 430 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MCUQ8NE86 351 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 PCED1BQ96HM7 432 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 SMC6Q96SB8 1091 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ULBP1Q9BZM6 244 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 SAMD15Q9P1V8 674 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 TEX264Q9Y6I9 313 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 GOLGA6L7A0A1B0GV03 622 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ANKRD65E5RJM6 399 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MGEA5O60502 916 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 DGKIO75912 1065 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 CABYRO75952 493 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 GOT1P17174 413 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 GRIK3Q13003 919 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 LPIN1Q14693 890 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 KCNT2Q6UVM3 1135 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 UROC1Q96N76 676 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 CYTH2Q99418 400 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 MAGEB5Q9BZ81 275 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 ETNK1Q9HBU6 452 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 SSU72Q9NP77 194 aaKnown RBP17.3■□□□□ 0.36
SAMM50-201ENST00000350028 PNPLA8Q9NP80 782 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 RRN3Q9NYV6 651 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 DSEQ9UL01 958 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 CHMP2BQ9UQN3 213 aa17.3■□□□□ 0.36
SAMM50-201ENST00000350028 CAPN9O14815 690 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 CYP11A1P05108 521 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 PRKAR2AP13861 404 aaKnown RBP17.29■□□□□ 0.36
SAMM50-201ENST00000350028 MAP2K2P36507 400 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 MSH2P43246 934 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 IL9RQ01113 521 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 ITIH4Q14624 930 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 C10orf67Q8IYJ2 551 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 PYROXD2Q8N2H3 581 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 ZMIZ2Q8NF64 920 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 CCDC110Q8TBZ0 833 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 LRRC39Q96DD0 335 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 SMARCD1Q96GM5 515 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 MAGEB18Q96M61 343 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 ACBD6Q9BR61 282 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 OSBPL7Q9BZF2 842 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms