RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ATXN2LQ8WWM7 1075 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ZSCAN5BA6NJL1 495 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 M0QX08 132 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ASLP04424 464 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 HNRNPCL4P0DMR1 293 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ITGALP20701 1170 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 COMTP21964 271 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 FCGRTP55899 365 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 KCNJ2P63252 427 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SREBF2Q12772 1141 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 RBM20Q5T481 1227 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 IPMKQ8NFU5 416 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 RBM12Q9NTZ6 932 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 TBX20Q9UMR3 447 aa11.41□□□□□ -0.58
SMARCE1-202ENST00000348513 ARP10275 920 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 NR1I3Q14994 352 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 ANKDD1AQ495B1 522 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 HASPINQ8TF76 798 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PHF2O75151 1096 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MYO1DO94832 1006 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 CRYZL1O95825 349 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 COPZ1P61923 177 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 EPS8Q12929 822 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MYBPC3Q14896 1274 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 TTMPQ5BVD1 217 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 ARSHQ5FYA8 562 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 SPDYAQ5MJ70 313 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 SOX13Q9UN79 622 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PTPRUQ92729 1446 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 HTR3EA5X5Y0 456 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.588e-8■□□□□ 8.3
SMARCE1-202ENST00000348513 NIPAL1Q6NVV3 410 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 C1orf131Q8NDD1 294 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 RBM15Q96T37 977 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 DPP3Q9NY33 737 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 ZC3H7BQ9UGR2 993 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 N6AMT1Q9Y5N5 214 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PIK3C2BO00750 1634 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 ANGPT2O15123 496 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MED24O75448 989 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PORP16435 677 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 IL32P24001 234 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 CPA2P48052 419 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 GTF2A2P52657 109 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 RAD23AP54725 363 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 PIGHQ14442 188 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 FNIP1Q8TF40 1166 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 TAMM41Q96BW9 452 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 NARS2Q96I59 477 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 DNAJC11Q9NVH1 559 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 UVRAGQ9P2Y5 699 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
SMARCE1-202ENST00000348513 MAP3K6O95382 1288 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 HSMCR30P0CW71 290 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 STILQ15468 1287 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 NBPF12Q5TAG4 269 aaPredicted RBP11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 RNF180Q86T96 592 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 ELOVL6Q9H5J4 265 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 PCMTD2Q9NV79 361 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 SNX13Q9Y5W8 968 aa11.4□□□□□ -0.59
SMARCE1-202ENST00000348513 TMEM114B3SHH9 223 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 GPD1P21695 349 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 CASKIN2Q8WXE0 1202 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 DLC1Q96QB1 1528 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 TRPC5OSA6NMA1 111 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 EIF3DO15371 548 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 IL4RP24394 825 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 KCNJ1P48048 391 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 RHAGQ02094 409 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 BFSP2Q13515 415 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 GTF2H3Q13889 308 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 USP10Q14694 798 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 RAD9BQ6WBX8 426 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 RASSF6Q6ZTQ3 369 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 SH3BP5LQ7L8J4 393 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 DCP1BQ8IZD4 617 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 TSPAN14Q8NG11 270 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 PJA1Q8NG27 643 aa11.39□□□□□ -0.59
SMARCE1-202ENST00000348513 SPATA18Q8TC71 538 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms