RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ARMC2Q8NEN0 867 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 GRAMD1AQ96CP6 724 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 GTSE1Q9NYZ3 720 aa11.23□□□□□ -0.61
CLCN6-202ENST00000346436 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 IGSF6O95976 241 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 GFAPP14136 432 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 HTR1BP28222 390 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PTK7Q13308 1070 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 SNX31Q8N9S9 440 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 MIPOL1Q8TD10 442 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TSC22D3Q99576 134 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 EML4Q9HC35 981 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NAALADL1Q9UQQ1 740 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 KRT87PA6NCN2 255 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ADH1CP00326 375 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 RARRES1P49788 294 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NOL9Q5SY16 702 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TRPM4Q8TD43 1214 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 HASPINQ8TF76 798 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 MTMR12Q9C0I1 747 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 STOML1Q9UBI4 398 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 FOXO6A8MYZ6 492 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TBC1D12O60347 775 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ERN1O75460 977 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 INHAP05111 366 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 LY6KQ17RY6 165 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ANKRD20A2Q5SQ80 823 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ANKRD20A1Q5TYW2 823 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PRCCQ92733 491 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PRPF18Q99633 342 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ARHGEF38Q9NXL2 777 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ANGPTL2Q9UKU9 493 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ATP9BO43861 1147 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 LGALS2P05162 132 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ASGR1P07306 291 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PGM1P36871 562 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 GEMP55040 296 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 HLA-DQA1Q5Y7H0 255 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 RD3Q7Z3Z2 195 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TRMT11Q7Z4G4 463 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 WDR75Q8IWA0 830 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 C4orf19Q8IY42 314 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 EMC1Q8N766 993 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 CDY2AQ9Y6F7 541 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NID2Q14112 1375 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NDUFB5O43674 189 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 EPHB2P29323 1055 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 CHKAP35790 457 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 PGM5Q15124 567 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 HABP4Q5JVS0 413 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TMCO4Q5TGY1 634 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 C12orf50Q8NA57 414 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ALG3Q92685 438 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 TMEM237Q96Q45 408 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 SERPINI1Q99574 410 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 SHCBP1LQ9BZQ2 653 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 AGO4Q9HCK5 861 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 CHCHD3Q9NX63 227 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 SMG5Q9UPR3 1016 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 APOBEC2Q9Y235 224 aaKnown RBP11.22□□□□□ -0.61
CLCN6-202ENST00000346436 LRRC37A3O60309 1634 aa11.22□□□□□ -0.61
CLCN6-202ENST00000346436 ZSCAN5DPP0CG00 497 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 RBP3P10745 1247 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 NCALDP61601 193 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
CLCN6-202ENST00000346436 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
CLCN6-202ENST00000346436 ATP6V1G2O95670 118 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 CYP24A1Q07973 514 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 CLEC16AQ2KHT3 1053 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 IQCKQ8N0W5 287 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 TMA16Q96EY4 203 aaKnown RBP11.21□□□□□ -0.61
CLCN6-202ENST00000346436 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms