RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ABCA9Q8IUA7 1624 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 EDF1O60869 148 aaKnown RBP17.93■□□□□ 0.46
SPAST-202ENST00000345662 IREB2P48200 963 aaKnown RBP17.93■□□□□ 0.46
SPAST-202ENST00000345662 BNIP1Q12981 228 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 VPS9D1Q9Y2B5 631 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 NCANO14594 1321 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 TCRBV5S4A2TA0A5A2 114 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 KLRC4O43908 158 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 MYL4P12829 197 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 RAD51Q06609 339 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 BFSP2Q13515 415 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 CYP51A1Q16850 503 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 IER5Q5VY09 327 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 RIOX1Q9H6W3 641 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 SFMBT1Q9UHJ3 866 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 CEP152O94986 1710 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 DPPA5A6NC42 116 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 DNM1LO00429 736 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 MGRN1O60291 552 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 IL12RB1P42701 662 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 CSHL1Q14406 222 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 NR1D2Q14995 579 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 SLC25A23Q9BV35 468 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 MTMR12Q9C0I1 747 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 RMND5AQ9H871 391 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 PRMT7Q9NVM4 692 aaPredicted RBP17.93■□□□□ 0.46
SPAST-202ENST00000345662 TAF4O00268 1085 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 VWA5AO00534 786 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 CD4P01730 458 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 GCNT1Q02742 428 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 SNX17Q15036 470 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 ARHGAP17Q68EM7 881 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 XRRA1Q6P2D8 792 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 ULK2Q8IYT8 1036 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 COLGALT1Q8NBJ5 622 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 PPP1R10Q96QC0 940 aaKnown RBP17.93■□□□□ 0.46
SPAST-202ENST00000345662 VTA1Q9NP79 307 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 DMTF1Q9Y222 760 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 NDUFAF1Q9Y375 327 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 TPRKBQ9Y3C4 175 aa17.93■□□□□ 0.46
SPAST-202ENST00000345662 A8MUI8 341 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 MYL3P08590 195 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 CCT8P50990 548 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 FOLH1Q04609 750 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
SPAST-202ENST00000345662 LRRC55Q6ZSA7 311 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 SNX31Q8N9S9 440 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 ATG16L2Q8NAA4 619 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 C19orf18Q8NEA5 215 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 DCUN1D1Q96GG9 259 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 OSBPL7Q9BZF2 842 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 GPAMQ9HCL2 828 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 C6orf203Q9P0P8 240 aaPredicted RBP17.92■□□□□ 0.46
SPAST-202ENST00000345662 A0A096LPK6 155 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 OGTO15294 1046 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 NTSR2O95665 410 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 HSMCR30P0CW71 290 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 VAC14Q08AM6 782 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 STK32CQ86UX6 486 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 FLCNQ8NFG4 579 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 WDR70Q9NW82 654 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 ZMYM2Q9UBW7 1377 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 FRMPD1Q5SYB0 1578 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 M0QYT0 321 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 FAM20BO75063 409 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 MT-CO1P00395 513 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 ALOX12P18054 663 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 ACAP1Q15027 740 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 KLHL23Q8NBE8 558 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 SETD9Q8NE22 299 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 EZH1Q92800 747 aaPredicted RBP17.92■□□□□ 0.46
SPAST-202ENST00000345662 SH3KBP1Q96B97 665 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 CISHQ9NSE2 258 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 AP4E1Q9UPM8 1137 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 MAGEB16A2A368 324 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 NBNO60934 754 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 AKT1P31749 480 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 SPANXN2Q5MJ10 180 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 RXFP2Q8WXD0 754 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 GANQ9H2C0 597 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 RAD21L1Q9H4I0 556 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 VANGL2Q9ULK5 521 aa17.92■□□□□ 0.46
SPAST-202ENST00000345662 AGPSO00116 658 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 NCAM1P13591 858 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 PGAM1P18669 254 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 SEZ6Q53EL9 994 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 IL31Q6EBC2 164 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 PLEKHG4BQ96PX9 1271 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 CPNE1Q99829 537 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 GALNT8Q9NY28 637 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 KLHL3Q9UH77 587 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 TRMT6Q9UJA5 497 aaKnown RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 RAD54BQ9Y620 910 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 ENTPD3O75355 529 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 MAPTP10636 758 aaKnown RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 UQCRBP14927 111 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms