RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 FYNP06241 537 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 LCP1P13796 627 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 LAMA1P25391 3075 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 PDCLQ13371 301 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 NNTQ13423 1086 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 RALGAPA1Q6GYQ0 2036 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 TSSK4Q6SA08 328 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 SYT13Q7L8C5 426 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 ASCL5Q7RTU5 278 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 ALYREFQ86V81 257 aaKnown RBP20.74■□□□□ 0.91
CLTA-202ENST00000345519 WDTC1Q8N5D0 677 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 NKD2Q969F2 451 aaPredicted RBP20.74■□□□□ 0.91
CLTA-202ENST00000345519 P2RY11Q96G91 374 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 PNKPQ96T60 521 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 FBXO10Q9UK96 956 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 STRIP2Q9ULQ0 834 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 SIK3Q9Y2K2 1263 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 CEP192Q8TEP8 1941 aa20.74■□□□□ 0.91
CLTA-202ENST00000345519 PAPSS1O43252 624 aaPredicted RBP20.73■□□□□ 0.91
CLTA-202ENST00000345519 PENKP01210 267 aaPredicted RBP20.73■□□□□ 0.91
CLTA-202ENST00000345519 CDH5P33151 784 aaPredicted RBP20.73■□□□□ 0.91
CLTA-202ENST00000345519 PTK2Q05397 1052 aa20.73■□□□□ 0.91
CLTA-202ENST00000345519 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
CLTA-202ENST00000345519 USP33Q8TEY7 942 aa20.73■□□□□ 0.91
CLTA-202ENST00000345519 EPC1Q9H2F5 836 aa20.73■□□□□ 0.91
CLTA-202ENST00000345519 AGO1Q9UL18 857 aaKnown RBP20.73■□□□□ 0.91
CLTA-202ENST00000345519 R4GN57 208 aa20.73■□□□□ 0.91
CLTA-202ENST00000345519 DOCK4Q8N1I0 1966 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 LGALS16A8MUM7 142 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 E5RJQ4 531 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 F8VZ95 297 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 TULP3O75386 442 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 KAT7O95251 611 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 CORO1AP31146 461 aaKnown RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 CHKAP35790 457 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 GRIA2P42262 883 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 KIR2DL1P43626 348 aaPredicted RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 SLC6A11P48066 632 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 COPB1P53618 953 aaKnown RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 RING1Q06587 406 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 DRAP1Q14919 205 aaPredicted RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 HSF5Q4G112 596 aaPredicted RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 SLC47A2Q86VL8 602 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 FMNL3Q8IVF7 1028 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 TERB1Q8NA31 727 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 SUMF1Q8NBK3 374 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 KCNV2Q8TDN2 545 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 DDX1Q92499 740 aaKnown RBP20.72■□□□□ 0.91
CLTA-202ENST00000345519 ACDQ96AP0 544 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 STK33Q9BYT3 514 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 WDR35Q9P2L0 1181 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 DNAH14Q0VDD8 3507 aa20.72■□□□□ 0.91
CLTA-202ENST00000345519 NUP205Q92621 2012 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 IGLV3-25P01717 112 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 PNMA6AP0CW24 399 aaPredicted RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 TNFRSF4P43489 277 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 JAM2P57087 298 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 BPIFB4P59827 614 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 MRPS21P82921 87 aaKnown RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 EIF4EBP2Q13542 120 aaPredicted RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 PREPLQ4J6C6 727 aaPredicted RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 ANO6Q4KMQ2 910 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 FYB2Q5VWT5 728 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 RNF43Q68DV7 783 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 CAVIN1Q6NZI2 390 aaKnown RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 CAMKK1Q8N5S9 505 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 RPLP0P6Q8NHW5 317 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 EDEM1Q92611 657 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 ERGIC2Q96RQ1 377 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 TRIM62Q9BVG3 475 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 IRX2Q9BZI1 471 aaPredicted RBP20.71■□□□□ 0.91
CLTA-202ENST00000345519 VPS16Q9H269 839 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 ASNSD1Q9NWL6 643 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 STARD13Q9Y3M8 1113 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 GPR179Q6PRD1 2367 aa20.71■□□□□ 0.91
CLTA-202ENST00000345519 EP300Q09472 2414 aaPredicted RBP20.7■□□□□ 0.91
CLTA-202ENST00000345519 SLC12A8A0AV02 714 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 PIK3R2O00459 728 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 GFRA3O60609 400 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 APODP05090 189 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 TYRP14679 529 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 ZNF445P59923 1031 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 LONP2Q86WA8 852 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 SFTPA1Q8IWL2 248 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 DHX40Q8IX18 779 aaKnown RBP20.7■□□□□ 0.9
CLTA-202ENST00000345519 SCUBE3Q8IX30 993 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 EPS8L1Q8TE68 723 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 RNF139Q8WU17 664 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 AZIN2Q96A70 460 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 CPXM1Q96SM3 734 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 BBS2Q9BXC9 721 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 NAT10Q9H0A0 1025 aaKnown RBP20.7■□□□□ 0.9
CLTA-202ENST00000345519 ARHGEF4Q9NR80 690 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 SFMBT1Q9UHJ3 866 aa20.7■□□□□ 0.9
CLTA-202ENST00000345519 LMNAP02545 664 aaKnown RBP20.69■□□□□ 0.9
CLTA-202ENST00000345519 TPM2P07951 284 aa20.69■□□□□ 0.9
CLTA-202ENST00000345519 GLI1P08151 1106 aa20.69■□□□□ 0.9
CLTA-202ENST00000345519 CYP11B1P15538 503 aa20.69■□□□□ 0.9
CLTA-202ENST00000345519 CNR2P34972 360 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms