RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 PRSS55Q6UWB4 352 aaPredicted RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 SCD5Q86SK9 330 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 TP53INP2Q8IXH6 220 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 CCDC89Q8N998 374 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 LRRC45Q96CN5 670 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 ZNF670Q9BS34 389 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 OSER1Q9NX31 292 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 HSPA8P11142 646 aaKnown RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 CSF2RAP15509 400 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 RPL22P35268 128 aaKnown RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 PMS2P54278 862 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 ZNF844Q08AG5 666 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 SLC29A2Q14542 456 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 KCTD16Q68DU8 428 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 HIBCHQ6NVY1 386 aaPredicted RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 FBXO46Q6PJ61 603 aaPredicted RBP14.11□□□□□ -0.15
CDC42-202ENST00000344548 MAP7D3Q8IWC1 876 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 SH2D3CQ8N5H7 860 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 P3H4Q92791 437 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 USP29Q9HBJ7 922 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 MED4Q9NPJ6 270 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 ANAPC5Q9UJX4 755 aa14.11□□□□□ -0.15
CDC42-202ENST00000344548 COL4A4P53420 1690 aaPredicted RBP14.1□□□□□ -0.15
CDC42-202ENST00000344548 TCRBV7S3A2A0A539 114 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 SYN3O14994 580 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 TRAPPC3O43617 180 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 LBX1P52954 281 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 DEFB103AP81534 67 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 MTM1Q13496 603 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 MAPRE1Q15691 268 aaKnown RBP14.1□□□□□ -0.15
CDC42-202ENST00000344548 ANKRD22Q5VYY1 191 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 TAC4Q86UU9 113 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 TTC13Q8NBP0 860 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.1□□□□□ -0.15
CDC42-202ENST00000344548 ARMC5Q96C12 935 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 CWH43Q9H720 699 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 DDIT4Q9NX09 232 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 STAP1Q9ULZ2 295 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 PATJQ8NI35 1801 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 APOL1O14791 398 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 TBC1D4O60343 1298 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 DGKIO75912 1065 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 CLTBP09497 229 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 RPL17P18621 184 aaKnown RBP14.1□□□□□ -0.15
CDC42-202ENST00000344548 ADRA1BP35368 520 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 HSP90B2PQ58FF3 399 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 CEP85LQ5SZL2 805 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 SYCP2LQ5T4T6 812 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 C4orf50Q6ZRC1 276 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 COLEC11Q9BWP8 271 aa14.1□□□□□ -0.15
CDC42-202ENST00000344548 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
CDC42-202ENST00000344548 DNALI1O14645 258 aaPredicted RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 CREB3O43889 395 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 CAPN15O75808 1086 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 ACRP10323 421 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 RBL1P28749 1068 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 TFDP2Q14188 446 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 HP1BP3Q5SSJ5 553 aaPredicted RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 DQX1Q8TE96 717 aaKnown RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 PABPC3Q9H361 631 aaKnown RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 ACBD3Q9H3P7 528 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 PCDH9Q9HC56 1237 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 ARHGEF4Q9NR80 690 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.09□□□□□ -0.156e-23■■■■□ 22.6
CDC42-202ENST00000344548 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
CDC42-202ENST00000344548 SFMBT1Q9UHJ3 866 aa14.09□□□□□ -0.15
CDC42-202ENST00000344548 GOLGA8MH3BSY2 632 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 MCF2LO15068 1137 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 MSI1O43347 362 aaKnown RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 BANF1O75531 89 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 EFEMP2O95967 443 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 PPARDQ03181 441 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 LMNB2Q03252 620 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 GPS2Q13227 327 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 EIF4EBP2Q13542 120 aaPredicted RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 MTMR3Q13615 1198 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 IKBKEQ14164 716 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 RNASEH2BQ5TBB1 312 aaKnown RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 RNF139Q8WU17 664 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 PRDM5Q9NQX1 630 aaPredicted RBP14.08□□□□□ -0.15
CDC42-202ENST00000344548 DTLQ9NZJ0 730 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.15
CDC42-202ENST00000344548 SF3B1O75533 1304 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■■■■ 113.4
CDC42-202ENST00000344548 ARHGEF37A1IGU5 675 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 H7C0C1 242 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 RIPK2O43353 540 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 RARGP13631 454 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 DESP17661 470 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 GBP1P32455 592 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 ATP5OP48047 213 aa14.08□□□□□ -0.16
CDC42-202ENST00000344548 YWHAGP61981 247 aaKnown RBP eCLIP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms