RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NFIBO00712 420 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ICAM1P05362 532 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DLG4P78352 724 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PPP3CAQ08209 521 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MRPL28Q13084 256 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MMRN1Q13201 1228 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GRM1Q13255 1194 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ECM1Q16610 540 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 EPC2Q52LR7 807 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DENND1BQ6P3S1 775 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ZDHHC13Q8IUH4 622 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CLVS1Q8IUQ0 354 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RDH11Q8TC12 318 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ITFG2Q969R8 447 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF333Q96JL9 665 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 WRNIP1Q96S55 665 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 WDR41Q9HAD4 459 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SLC39A10Q9ULF5 831 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 STXBP5LQ9Y2K9 1186 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 HACD1B0YJ81 288 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TKTP29401 623 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 NDUFA5Q16718 116 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 N4BP2L1Q5TBK1 243 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ANGEL2Q5VTE6 544 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ANKS1BQ7Z6G8 1248 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 FAM9CQ8IZT9 166 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 APPL2Q8NEU8 664 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 NAT14Q8WUY8 206 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SH3GL1Q99961 368 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CCDC167Q9P0B6 97 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CHKBQ9Y259 395 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MTA2O94776 668 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 LCP1P13796 627 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PRKCEQ02156 737 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TTLL4Q14679 1199 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SLC10A5Q5PT55 438 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CDC42EP5Q6NZY7 148 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MAP4K3Q8IVH8 894 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 S100A14Q9HCY8 104 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CISHQ9NSE2 258 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM247A6NEH6 219 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ADCY6O43306 1168 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CD4P01730 458 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GSNP06396 782 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GABRB2P47870 512 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PSEN1P49768 467 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MYL6P60660 151 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 FMO1Q01740 532 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KHDC1Q4VXA5 237 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DCAF6Q58WW2 860 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ARMC3Q5W041 872 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SVOPQ8N4V2 548 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 AADATQ8N5Z0 425 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 OR6P1Q8NGX9 317 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 COX4I2Q96KJ9 171 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 FAM8A1Q9UBU6 413 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 AGAP1Q9UPQ3 857 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PLLPQ9Y342 182 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 IL1R1P14778 569 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 PGAM1P18669 254 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CCNA2P20248 432 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KDELR1P24390 212 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SLC15A2Q16348 729 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DGUOKQ16854 277 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 UGT3A1Q6NUS8 523 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ZCCHC23Q6ZST2 131 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KRT27Q7Z3Y8 459 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 USP13Q92995 863 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 HPDLQ96IR7 371 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MTMR12Q9C0I1 747 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TRPC7Q9HCX4 862 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CDH22Q9UJ99 828 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RAD54BQ9Y620 910 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KIF13BQ9NQT8 1826 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM114B3SHH9 223 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 TPP1O14773 563 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CRABP2P29373 138 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 CRHR1P34998 444 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GP5P40197 560 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 MTTPP55157 894 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 GTF2BQ00403 316 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RUNX1T1Q06455 604 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 KCNA1Q09470 495 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 EPS8Q12929 822 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 DHFR2Q86XF0 187 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RBM15BQ8NDT2 890 aaKnown RBP4.92□□□□□ -1.62
CSMD3-203ENST00000343508 SHCBP1Q8NEM2 672 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 RFWD2Q8NHY2 731 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 ECM29Q5VYK3 1845 aa4.92□□□□□ -1.62
CSMD3-203ENST00000343508 H0YGN5 161 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CDH3P22223 829 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 UBAP2LQ14157 1087 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ZBTB41Q5SVQ8 909 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF669Q96BR6 464 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 POLIQ9UNA4 740 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SLC8A2Q9UPR5 921 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 R3HDM2Q9Y2K5 976 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms