RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
SYCE1-202ENST00000343131 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 TSG101Q99816 390 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 DNAI2Q9GZS0 605 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 CD248Q9HCU0 757 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 TMEM9BQ9NQ34 198 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 FSCN3Q9NQT6 498 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 TMEM74BQ9NUR3 256 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 CLIC5Q9NZA1 410 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 WDR35Q9P2L0 1181 aa16.64■□□□□ 0.25
SYCE1-202ENST00000343131 NYNRINQ9P2P1 1898 aaKnown RBP16.64■□□□□ 0.25
SYCE1-202ENST00000343131 AKAP13Q12802 2813 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 ITPKAP23677 461 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 PMLP29590 882 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 MAPK8P45983 427 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 NOVA1P51513 510 aaKnown RBP16.63■□□□□ 0.25
SYCE1-202ENST00000343131 TKTL1P51854 596 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 IRX4P78413 519 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 RPL6Q02878 288 aaKnown RBP16.63■□□□□ 0.25
SYCE1-202ENST00000343131 LRMPQ12912 555 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 CUL2Q13617 745 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 TRIM61Q5EBN2 209 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 RAB41Q5JT25 222 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 ARHGAP17Q68EM7 881 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 NUDT18Q6ZVK8 323 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
SYCE1-202ENST00000343131 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 KCNV2Q8TDN2 545 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
SYCE1-202ENST00000343131 GABRG3Q99928 467 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 ULBP1Q9BZM6 244 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 MARCH2Q9P0N8 246 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 TSPAN16Q9UKR8 245 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 STARD13Q9Y3M8 1113 aa16.63■□□□□ 0.25
SYCE1-202ENST00000343131 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 CDX4O14627 284 aaPredicted RBP16.62■□□□□ 0.25
SYCE1-202ENST00000343131 CISD3P0C7P0 127 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 CD19P15391 556 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 YWHAGP61981 247 aaKnown RBP eCLIP16.62■□□□□ 0.25
SYCE1-202ENST00000343131 PDE4CQ08493 712 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 ADIGQ0VDE8 80 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 FYB2Q5VWT5 728 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 ISM2Q6H9L7 571 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 DENND1CQ8IV53 801 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 TTC39CQ8N584 583 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 ENGASEQ8NFI3 743 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 SMARCE1Q969G3 411 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 GSDMAQ96QA5 445 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 CDK5RAP1Q96SZ6 601 aaKnown RBP16.62■□□□□ 0.25
SYCE1-202ENST00000343131 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
SYCE1-202ENST00000343131 AGO1Q9UL18 857 aaKnown RBP16.62■□□□□ 0.25
SYCE1-202ENST00000343131 TP53BP1Q12888 1972 aaPredicted RBP16.61■□□□□ 0.25
SYCE1-202ENST00000343131 IGHV1OR15-9A0A0B4J2B8 117 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 WASH3PC4AMC7 463 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 KRT37O76014 449 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 PENKP01210 267 aaPredicted RBP16.61■□□□□ 0.25
SYCE1-202ENST00000343131 CFIP05156 583 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 BCAT1P54687 386 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 MFAP3P55082 362 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 ZNF252P-AS1Q0IIN9 211 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 GEN1Q17RS7 908 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 UAP1L1Q3KQV9 507 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 SH3PXD2AQ5TCZ1 1133 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 SYT12Q8IV01 421 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 ZNF276Q8N554 614 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 ANKRD52Q8NB46 1076 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 ARMCX3Q9UH62 379 aaPredicted RBP16.61■□□□□ 0.25
SYCE1-202ENST00000343131 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
SYCE1-202ENST00000343131 PILRBQ9UKJ0 227 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 IGF2RP11717 2491 aa16.61■□□□□ 0.25
SYCE1-202ENST00000343131 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
SYCE1-202ENST00000343131 AP5Z1O43299 807 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 SMC2O95347 1197 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 ZBED1O96006 694 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
SYCE1-202ENST00000343131 ENGP17813 658 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 SLC8A3P57103 927 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 COG7P83436 770 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
SYCE1-202ENST00000343131 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
SYCE1-202ENST00000343131 ST3GAL2Q16842 350 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 SDE2Q6IQ49 451 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 KIAA1324Q6UXG2 1013 aaKnown RBP16.6■□□□□ 0.25
SYCE1-202ENST00000343131 CACUL1Q86Y37 369 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 UBR7Q8N806 425 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
SYCE1-202ENST00000343131 EDEM1Q92611 657 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms