RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TLR6Q9Y2C9 796 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 OBSL1O75147 1896 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 SOX1O00570 391 aaPredicted RBP17.02■□□□□ 0.32
SNED1-202ENST00000342631 OAS1P00973 400 aaKnown RBP17.02■□□□□ 0.32
SNED1-202ENST00000342631 RHOP08100 348 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNED1-202ENST00000342631 CXCR3P49682 368 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 BRMS1LQ5PSV4 323 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 TEKT4Q8WW24 435 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 SMG7Q92540 1137 aaKnown RBP17.02■□□□□ 0.32
SNED1-202ENST00000342631 NTAN1Q96AB6 310 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 PIDD1Q9HB75 910 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
SNED1-202ENST00000342631 HBS1LQ9Y450 684 aaKnown RBP17.02■□□□□ 0.32
SNED1-202ENST00000342631 CES2O00748 559 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ENC1O14682 589 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 GLP2RO95838 553 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ATP1A1P05023 1023 aaKnown RBP17.02■□□□□ 0.31
SNED1-202ENST00000342631 MYL4P12829 197 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 TCP1P17987 556 aaKnown RBP17.02■□□□□ 0.31
SNED1-202ENST00000342631 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.31
SNED1-202ENST00000342631 PEX5P50542 639 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 RWDD2BP57060 319 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 TAS2R40P59535 323 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 PITX1P78337 314 aaPredicted RBP17.02■□□□□ 0.31
SNED1-202ENST00000342631 RING1Q06587 406 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 NME3Q13232 169 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 TUBB2AQ13885 445 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 PPP2R5DQ14738 602 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ARL13BQ3SXY8 428 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ARHGAP15Q53QZ3 475 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 KATNAL2Q8IYT4 538 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ADAM33Q9BZ11 813 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 NACA2Q9H009 215 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.31
SNED1-202ENST00000342631 PIGVQ9NUD9 493 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 SNX12Q9UMY4 172 aa17.02■□□□□ 0.31
SNED1-202ENST00000342631 MDM4O15151 490 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 DDX3YO15523 660 aaKnown RBP17.01■□□□□ 0.31
SNED1-202ENST00000342631 OLFM2O95897 454 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 CCR1P32246 355 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 COG7P83436 770 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 COL19A1Q14993 1142 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 TRIP4Q15650 581 aaPredicted RBP17.01■□□□□ 0.31
SNED1-202ENST00000342631 CTC1Q2NKJ3 1217 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
SNED1-202ENST00000342631 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
SNED1-202ENST00000342631 SCYL2Q6P3W7 929 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 CPNE8Q86YQ8 564 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 CARD9Q9H257 536 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 WDCPQ9H6R7 721 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNED1-202ENST00000342631 HCFC1R1Q9NWW0 138 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 PACSIN2Q9UNF0 486 aaPredicted RBP17.01■□□□□ 0.31
SNED1-202ENST00000342631 SAR1BQ9Y6B6 198 aa17.01■□□□□ 0.31
SNED1-202ENST00000342631 FANCGO15287 622 aa17■□□□□ 0.31
SNED1-202ENST00000342631 COCHO43405 550 aa17■□□□□ 0.31
SNED1-202ENST00000342631 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
SNED1-202ENST00000342631 ITIH3Q06033 890 aa17■□□□□ 0.31
SNED1-202ENST00000342631 SCAPQ12770 1279 aa17■□□□□ 0.31
SNED1-202ENST00000342631 ERMARDQ5T6L9 678 aa17■□□□□ 0.31
SNED1-202ENST00000342631 DAB2IPQ5VWQ8 1189 aa17■□□□□ 0.31
SNED1-202ENST00000342631 GPR149Q86SP6 731 aa17■□□□□ 0.31
SNED1-202ENST00000342631 ADAM32Q8TC27 787 aa17■□□□□ 0.31
SNED1-202ENST00000342631 ZNF592Q92610 1267 aa17■□□□□ 0.31
SNED1-202ENST00000342631 SLC39A13Q96H72 371 aa17■□□□□ 0.31
SNED1-202ENST00000342631 PBKQ96KB5 322 aa17■□□□□ 0.31
SNED1-202ENST00000342631 CALCOCO1Q9P1Z2 691 aa17■□□□□ 0.31
SNED1-202ENST00000342631 PCSK1NQ9UHG2 260 aa17■□□□□ 0.31
SNED1-202ENST00000342631 SFMBT1Q9UHJ3 866 aa17■□□□□ 0.31
SNED1-202ENST00000342631 IL1R2P27930 398 aa17■□□□□ 0.31
SNED1-202ENST00000342631 TBX4P57082 545 aa17■□□□□ 0.31
SNED1-202ENST00000342631 ADGRE1Q14246 886 aa17■□□□□ 0.31
SNED1-202ENST00000342631 PRSS36Q5K4E3 855 aa17■□□□□ 0.31
SNED1-202ENST00000342631 GRASPQ7Z6J2 395 aaPredicted RBP17■□□□□ 0.31
SNED1-202ENST00000342631 FAM131BQ86XD5 332 aa17■□□□□ 0.31
SNED1-202ENST00000342631 VSIG1Q86XK7 387 aa17■□□□□ 0.31
SNED1-202ENST00000342631 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
SNED1-202ENST00000342631 EXD1Q8NHP7 514 aa17■□□□□ 0.31
SNED1-202ENST00000342631 KRT35Q92764 455 aa17■□□□□ 0.31
SNED1-202ENST00000342631 RNF34Q969K3 372 aa17■□□□□ 0.31
SNED1-202ENST00000342631 LRCH3Q96II8 777 aa17■□□□□ 0.31
SNED1-202ENST00000342631 RASAL2Q9UJF2 1139 aa17■□□□□ 0.31
SNED1-202ENST00000342631 NUDT5Q9UKK9 219 aa17■□□□□ 0.31
SNED1-202ENST00000342631 PRRC2BQ5JSZ5 2229 aaKnown RBP16.99■□□□□ 0.31
SNED1-202ENST00000342631 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 A0A1W2PRU2 124 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 KCNK3O14649 394 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 ZRANB2O95218 330 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNED1-202ENST00000342631 TBX18O95935 607 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 IGLV3-27P01718 113 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 TCF4P15884 667 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 HDCP19113 662 aa16.99■□□□□ 0.31
SNED1-202ENST00000342631 IGFBP4P22692 258 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms