RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 SART1O43290 800 aaKnown RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 HSF2BPO75031 334 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 FTLP02792 175 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 FAM228BP0C875 321 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 WEE1P30291 646 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 GGCXP38435 758 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 SULT1E1P49888 294 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 SNX16P57768 344 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 EFHC1Q5JVL4 640 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 RNF34Q969K3 372 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 NXPE3Q969Y0 559 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 IQCDQ96DY2 449 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 DNAJC7Q99615 494 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 SELENOOQ9BVL4 669 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 NUCKS1Q9H1E3 243 aaKnown RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 PLK2Q9NYY3 685 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 CALCOCO1Q9P1Z2 691 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 NDRG2Q9UN36 371 aaKnown RBP13.78□□□□□ -0.2
TUBD1-202ENST00000340993 PIAS3Q9Y6X2 628 aa13.78□□□□□ -0.2
TUBD1-202ENST00000340993 CHADO15335 359 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 TSPAN3O60637 253 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 DAB1O75553 588 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 KLKB1P03952 638 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 GABRB2P47870 512 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 NUMBP49757 651 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 TBX4P57082 545 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 ANO4Q32M45 955 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 SLC26A9Q7LBE3 791 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 CNGA4Q8IV77 575 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 MCOLN2Q8IZK6 566 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 NAT16Q8N8M0 369 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 TC2NQ8N9U0 490 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 EDAQ92838 391 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 IRF7Q92985 503 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 E2F7Q96AV8 911 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 MCEEQ96PE7 176 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 MFSD1Q9H3U5 465 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 LSM7Q9UK45 103 aaKnown RBP13.77□□□□□ -0.21
TUBD1-202ENST00000340993 COL4A2P08572 1712 aa13.77□□□□□ -0.21
TUBD1-202ENST00000340993 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 M0QYT0 321 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 AKR1B10O60218 316 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 CALB1P05937 261 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 ALADP13716 330 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 CDK17Q00537 523 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 EML3Q32P44 896 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SH3PXD2AQ5TCZ1 1133 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 PHF13Q86YI8 300 aaPredicted RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 UBALD2Q8IYN6 164 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SCML4Q8N228 414 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SYN2Q92777 582 aaPredicted RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SLC2A13Q96QE2 648 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 TBCBQ99426 244 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 FAM83CQ9BQN1 747 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 OBP2AQ9NY56 170 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 M0R296 226 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 ARNTLO00327 626 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 CYP17A1P05093 508 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 KRT3P12035 628 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 PFKLP17858 780 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 COG7P83436 770 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 SIGLEC14Q08ET2 396 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 RUNX3Q13761 415 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 UBXN2BQ14CS0 331 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 MLF2Q15773 248 aaPredicted RBP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 LY6G5CQ5SRR4 150 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 RFWD3Q6PCD5 774 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 KLHDC10Q6PID8 442 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 TRIM67Q6ZTA4 783 aa13.76□□□□□ -0.21
TUBD1-202ENST00000340993 DDX42Q86XP3 938 aaKnown RBP eCLIP13.76□□□□□ -0.21
TUBD1-202ENST00000340993 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms