RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC4A5Q9BY07 1137 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 GANQ9H2C0 597 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 LGALS16A8MUM7 142 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 MED7O43513 233 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 STC2O76061 302 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 KLKB1P03952 638 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 DMWDQ09019 674 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 FBXO43Q4G163 708 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 LY6G5CQ5SRR4 150 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 Q6ZNB5 142 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 TADA2BQ86TJ2 420 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 MIB1Q86YT6 1006 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 WDTC1Q8N5D0 677 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 CAMKK1Q8N5S9 505 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 IRGQQ8WZA9 623 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 P2RY13Q9BPV8 354 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
VAPA-201ENST00000340541 SEMA4GQ9NTN9 838 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 RASAL2Q9UJF2 1139 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 KIAA1549LQ6ZVL6 1849 aa16.12■□□□□ 0.17
VAPA-201ENST00000340541 ATG2BQ96BY7 2078 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 SYCE3A1L190 88 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 SLC30A4O14863 429 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 EPHB6O15197 1021 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 EGFP01133 1207 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 DRD1P21728 446 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 PTK2Q05397 1052 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 NR1H3Q13133 447 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 RAPGEF1Q13905 1077 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 LPAL2Q16609 132 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 BTBD8Q5XKL5 378 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 CEP68Q76N32 757 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
VAPA-201ENST00000340541 TMEM110Q86TL2 294 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 C12orf40Q86WS4 652 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 EDEM1Q92611 657 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 CD101Q93033 1021 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 STK33Q9BYT3 514 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 MARCH2Q9P0N8 246 aa16.11■□□□□ 0.17
VAPA-201ENST00000340541 F8VZ95 297 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 PAPSS1O43252 624 aaPredicted RBP16.1■□□□□ 0.17
VAPA-201ENST00000340541 FBXO21O94952 628 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 FYNP06241 537 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 ZNF165P49910 485 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 COG7P83436 770 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 MESP2Q0VG99 397 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 PDCLQ13371 301 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 IQCB1Q15051 598 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 FKBP15Q5T1M5 1219 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 PKN3Q6P5Z2 889 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
VAPA-201ENST00000340541 TMEM25Q86YD3 366 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 SCUBE3Q8IX30 993 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 FAM160A2Q8N612 972 aaPredicted RBP16.1■□□□□ 0.17
VAPA-201ENST00000340541 CCDC26Q8TAB7 109 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
VAPA-201ENST00000340541 P2RY11Q96G91 374 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 MIS12Q9H081 205 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 LHX5Q9H2C1 402 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 ABCC13Q9NSE7 274 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
VAPA-201ENST00000340541 C2orf42Q9NWW7 574 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 TJP2Q9UDY2 1190 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 SLC8A2Q9UPR5 921 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 NCOR2Q9Y618 2525 aa16.1■□□□□ 0.17
VAPA-201ENST00000340541 SLC12A8A0AV02 714 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 E5RJQ4 531 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 HOXC11O43248 304 aaPredicted RBP16.09■□□□□ 0.17
VAPA-201ENST00000340541 ADH1CP00326 375 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 LTFP02788 710 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 TPM2P07951 284 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ADH5P11766 374 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 CYP11B1P15538 503 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 PTMSP20962 102 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ACADSBP45954 432 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 SLC6A11P48066 632 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 JAM2P57087 298 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 SYCP1Q15431 976 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 TRIP4Q15650 581 aaPredicted RBP16.09■□□□□ 0.17
VAPA-201ENST00000340541 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
VAPA-201ENST00000340541 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 PASD1Q8IV76 773 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ETFBKMTQ8IXQ9 262 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 PHTF2Q8N3S3 785 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ANKRD20A12PQ8NF67 263 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 GAB3Q8WWW8 586 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ERGIC2Q96RQ1 377 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 CPXM1Q96SM3 734 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms