RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 NFICP08651 508 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MSX2P35548 267 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 GRIA2P42262 883 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 GTF2A2P52657 109 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ATXN3P54252 364 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CES3Q6UWW8 571 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 NLRP4Q96MN2 994 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CCDC106Q9BWC9 280 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAN1C1Q9NR34 630 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF214Q9UL59 606 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PCDHGB4Q9UN71 923 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAGED2Q9UNF1 606 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PCDHGB5Q9Y5G0 923 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MYOCOSA0A1B0GUC4 107 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SPECC1L-ADORA2AF8WAN1 911 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TM7SF2O76062 418 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MICAL2O94851 1124 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PEX2P28328 305 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 NUBP1P53384 320 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 NOMO1Q15155 1222 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CMPK2Q5EBM0 449 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PPM1JQ5JR12 505 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SPDYAQ5MJ70 313 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SLFN12LQ6IEE8 588 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAVSQ7Z434 540 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZFAND2BQ8WV99 257 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 GBP5Q96PP8 586 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF212Q9UDV6 495 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADAMTS6Q9UKP5 1117 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 DNAJC16Q9Y2G8 782 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PARP14Q460N5 1801 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 BRCA2P51587 3418 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 A0A088AWK7 358 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SLC15A5A6NIM6 579 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ADCY3O60266 1144 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TGDSO95455 350 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SNRPAP09012 282 aaKnown RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CYP3A5P20815 502 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 GSTT1P30711 240 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 AQP4P55087 323 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 ACTR3P61158 418 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 DSG1Q02413 1049 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CUL3Q13618 768 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 EML3Q32P44 896 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PLD5Q8N7P1 536 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SLC4A11Q8NBS3 891 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 CMASQ8NFW8 434 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PNPOQ9NVS9 261 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 TAGLN3Q9UI15 199 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 SIX4Q9UIU6 781 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 PSAT1Q9Y617 370 aa12.38□□□□□ -0.43
CCDC144CP-201ENST00000340196 MYO18AQ92614 2054 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 A6NJR5 290 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 LDHAP00338 332 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 SETSIPP0DME0 302 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 IL4RP24394 825 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 CPOXP36551 454 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAGEA10P43363 369 aaPredicted RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 RAP1GDS1P52306 607 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 GBE1Q04446 702 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 DLG1Q12959 904 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 ZNF534Q76KX8 674 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 KCNK4Q9NYG8 393 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 GGA3Q9NZ52 723 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 FETUBQ9UGM5 382 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 HCRTO43612 131 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 KRT37O76014 449 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PROCP04070 461 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 ITGB3P05106 788 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PDGFRAP16234 1089 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 OSBPP22059 807 aa12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 STIP1P31948 543 aaKnown RBP12.37□□□□□ -0.43
CCDC144CP-201ENST00000340196 PHKA2P46019 1235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms