RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NCAM1P13591 858 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 ADRA1BP35368 520 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 ACTN2P35609 894 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 MNX1P50219 401 aaPredicted RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 ATXN1P54253 815 aaKnown RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 KCTD19Q17RG1 926 aaPredicted RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 C6orf118Q5T5N4 469 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 ZNF280DQ6N043 979 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 FAM131BQ86XD5 332 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 ANKLE1Q8NAG6 615 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 GLIS1Q8NBF1 620 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 SLC7A14Q8TBB6 771 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 TTC25Q96NG3 672 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 CWC15Q9P013 229 aaKnown RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 PAK5Q9P286 719 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
HPS1-202ENST00000338546 RAD54BQ9Y620 910 aa16.87■□□□□ 0.29
HPS1-202ENST00000338546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.86■□□□□ 0.29
HPS1-202ENST00000338546 F8W810 466 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 H7C0C1 242 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 TCEA3O75764 348 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 ABHD2P08910 425 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 ZSCAN5DPP0CG00 497 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 CYP2C18P33260 490 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
HPS1-202ENST00000338546 CHKAP35790 457 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 ATP5OP48047 213 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 CXCR3P49682 368 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 BSPRYQ5W0U4 402 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 C1orf228Q6PIY5 440 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 CCDC25Q86WR0 208 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 UNC45BQ8IWX7 931 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 ARFGAP2Q8N6H7 521 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 PGM2Q96G03 612 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 FRMD8Q9BZ67 464 aaPredicted RBP16.86■□□□□ 0.29
HPS1-202ENST00000338546 USP29Q9HBJ7 922 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 WDR6Q9NNW5 1121 aaKnown RBP16.86■□□□□ 0.29
HPS1-202ENST00000338546 ABCC13Q9NSE7 274 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 PIGVQ9NUD9 493 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 PCDHB5Q9Y5E4 795 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 CENPFP49454 3210 aa16.86■□□□□ 0.29
HPS1-202ENST00000338546 H7C4K7 107 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 ETS1P14921 441 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 GRIK1P39086 918 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 GDF10P55107 478 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 SKOR1P84550 965 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 TLE2Q04725 743 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 SLC39A12Q504Y0 691 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 NPNTQ6UXI9 565 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 PDZD4Q76G19 769 aaPredicted RBP16.85■□□□□ 0.29
HPS1-202ENST00000338546 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 NAT8LQ8N9F0 302 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 RNF139Q8WU17 664 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 C2orf15Q8WU43 125 aaKnown RBP16.85■□□□□ 0.29
HPS1-202ENST00000338546 PRCCQ92733 491 aaPredicted RBP16.85■□□□□ 0.29
HPS1-202ENST00000338546 RBM15Q96T37 977 aaKnown RBP eCLIP16.85■□□□□ 0.29
HPS1-202ENST00000338546 RHOBTB2Q9BYZ6 727 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 STMN4Q9H169 189 aaPredicted RBP16.85■□□□□ 0.29
HPS1-202ENST00000338546 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 COMMD8Q9NX08 183 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 MARCH5Q9NX47 278 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 ALOX15BO15296 676 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 IGLV3-25P01717 112 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 SLC11A1P49279 550 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
HPS1-202ENST00000338546 NME3Q13232 169 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 SLC45A4Q5BKX6 768 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 FAM171A1Q5VUB5 890 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 PPP1R21Q6ZMI0 780 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 KDM7AQ6ZMT4 941 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 CENPUQ71F23 418 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 ARHGAP18Q8N392 663 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 DDIT4Q9NX09 232 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 HEY1Q9Y5J3 304 aa16.85■□□□□ 0.29
HPS1-202ENST00000338546 DNAH12Q6ZR08 3092 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 TET1Q8NFU7 2136 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 CHADO15335 359 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 GALTP07902 379 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 GOT1P17174 413 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 HTR7P34969 479 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 MAGEA4P43358 317 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 SLC5A3P53794 718 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 ATN1P54259 1190 aaPredicted RBP16.84■□□□□ 0.29
HPS1-202ENST00000338546 PITX1P78337 314 aaPredicted RBP16.84■□□□□ 0.29
HPS1-202ENST00000338546 SEMA3BQ13214 749 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 EIF4EBP2Q13542 120 aaPredicted RBP16.84■□□□□ 0.29
HPS1-202ENST00000338546 IKBKEQ14164 716 aa16.84■□□□□ 0.29
HPS1-202ENST00000338546 PAFAH1B3Q15102 231 aaKnown RBP16.84■□□□□ 0.29
HPS1-202ENST00000338546 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms