RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 SMYD4Q8IYR2 804 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-202ENST00000337571 BHMTQ93088 406 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 GOLPH3LQ9H4A5 285 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 STRIP2Q9ULQ0 834 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 ABCA7Q8IZY2 2146 aa11.2□□□□□ -0.62
CAPN3-202ENST00000337571 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 MDM4O15151 490 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 TRIM24O15164 1050 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 NDUFS2O75306 463 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 STC2O76061 302 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 HMBSP08397 361 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 PRCPP42785 496 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 NOVA1P51513 510 aaKnown RBP11.19□□□□□ -0.62
CAPN3-202ENST00000337571 YWHAGP61981 247 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN3-202ENST00000337571 PNOCQ13519 176 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 STIM1Q13586 685 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 BECN1Q14457 450 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 UAP1L1Q3KQV9 507 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 TRIM61Q5EBN2 209 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 SCD5Q86SK9 330 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 SLC4A11Q8NBS3 891 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 CEP76Q8TAP6 659 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 UCMAQ8WVF2 138 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 SEMA4DQ92854 862 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 SMARCE1Q969G3 411 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 GSDMAQ96QA5 445 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
CAPN3-202ENST00000337571 ARMCX3Q9UH62 379 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-202ENST00000337571 MBD1Q9UIS9 605 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-202ENST00000337571 PATE3B3GLJ2 98 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 PRRT4C9JH25 899 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 GREM1O60565 184 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 CFIP05156 583 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 GABRG2P18507 467 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 PTGER3P43115 390 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 MAPK8P45983 427 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 TKTL1P51854 596 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 RAD23BP54727 409 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 MCCD1P59942 119 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-202ENST00000337571 CETN1Q12798 172 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 STARD3Q14849 445 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 ST3GAL2Q16842 350 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 RABEPKQ7Z6M1 372 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 DEFB119Q8N690 84 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
CAPN3-202ENST00000337571 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 TATDN2Q93075 761 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 IPO9Q96P70 1041 aaKnown RBP11.18□□□□□ -0.62
CAPN3-202ENST00000337571 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 CALCOCO1Q9P1Z2 691 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 EVLQ9UI08 416 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-202ENST00000337571 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
CAPN3-202ENST00000337571 MYO18AQ92614 2054 aaKnown RBP11.18□□□□□ -0.62
CAPN3-202ENST00000337571 A0A1W2PQF6 199 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 GFRA2O00451 464 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 NPC1O15118 1278 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ZBED1O96006 694 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CISD3P0C7P0 127 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CEACAM1P13688 526 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CD19P15391 556 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ITPKAP23677 461 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 HOXD12P35452 270 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 HARS2P49590 506 aaKnown RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ZNF132P52740 706 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 NUCB2P80303 420 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ARID5AQ03989 594 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 CUL2Q13617 745 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 DUOXA1Q1HG43 343 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ARHGAP17Q68EM7 881 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
CAPN3-202ENST00000337571 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms