RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 USE1Q9NZ43 259 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 PLAGL2Q9UPG8 496 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 DAB1O75553 588 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 KLRC1P26715 233 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 PTPN7P35236 360 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 KDSRQ06136 332 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 ZNF229Q9UJW7 825 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 GRAP2O75791 330 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 PPP1R37O75864 691 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 MYBL2P10244 700 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 CHRNB3Q05901 458 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 C10orf88Q9H8K7 445 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 FGFR2P21802 821 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 CCR3P51677 355 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 CYP24A1Q07973 514 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 MARC1Q5VT66 337 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 ZNF668Q96K58 619 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 ACO1P21399 889 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 PON1P27169 355 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 GRM3Q14832 879 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 PTGISQ16647 500 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 ANKRD23Q86SG2 305 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 OSBPL10Q9BXB5 764 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 HS6ST1O60243 411 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 DDHD2O94830 711 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 HMGCRP04035 888 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 CNPP09543 421 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 POLR2EP19388 210 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 CCND1P24385 295 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SMTNL2Q2TAL5 461 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 LUZP2Q86TE4 346 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
FN1-202ENST00000336916 TEX28O15482 410 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 MTSS1LQ765P7 747 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 PALB2Q86YC2 1186 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 OLFM1Q99784 485 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 MFSD1Q9H3U5 465 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 FAM124BQ9H5Z6 455 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 RPTORQ8N122 1335 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 GNG14A0A1W2PPG7 69 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 E7ENQ6 273 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 F5H423 210 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 SGTAO43765 313 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 RAD23BP54727 409 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 TBX4P57082 545 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 RHOAP61586 193 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 FAM71DQ8N9W8 422 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 NSL1Q96IY1 281 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 NDUFA13Q9P0J0 144 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 URADA6NGE7 173 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 SETMARQ53H47 684 aaPredicted RBP12.6□□□□□ -0.39
FN1-202ENST00000336916 C10orf53Q8N6V4 93 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 TAS2R13Q9NYV9 303 aa12.6□□□□□ -0.39
FN1-202ENST00000336916 PCDH8O95206 1070 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CCDC159P0C7I6 412 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 DSG3P32926 999 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 NUP107P57740 925 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 LRRC49Q8IUZ0 686 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CNBD2Q96M20 576 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 PADI4Q9UM07 663 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ZNF862O60290 1169 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 TALDO1P37837 337 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 NPTX2P47972 431 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 ACTRT1Q8TDG2 376 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 JADE3Q92613 823 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 H0Y3Z8 333 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 YWHAQP27348 245 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 SULT2A1Q06520 285 aa12.59□□□□□ -0.39
FN1-202ENST00000336916 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
FN1-202ENST00000336916 SRLQ86TD4 932 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms