RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PEBP4Q96S96 227 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 SHCBP1LQ9BZQ2 653 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 CDT1Q9H211 546 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 TSPAN16Q9UKR8 245 aa17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-201ENST00000335793 ACKR2O00590 384 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 NDST1P52848 882 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 NETO2Q8NC67 525 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 PAIP2BQ9ULR5 123 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 ATG7O95352 703 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 SLC25A41Q8N5S1 370 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 UBR7Q8N806 425 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 HIPK4Q8NE63 616 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 FAM172AQ8WUF8 416 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 LHX5Q9H2C1 402 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 SSU72Q9NP77 194 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 NOMO1Q15155 1222 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 FAM47CQ5HY64 1035 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 CFAP157Q5JU67 520 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 RNF157Q96PX1 679 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 TXNDC16Q9P2K2 825 aa17.09■□□□□ 0.33
CDC42EP4-201ENST00000335793 GPR25O00155 361 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 TARBP2Q15633 366 aaKnown RBP17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 C16orf46Q6P387 395 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 FAM183BPQ6ZVS7 135 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 FNIP1Q8TF40 1166 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 GGA3Q9NZ52 723 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 SPATA7Q9P0W8 599 aa17.08■□□□□ 0.33
CDC42EP4-201ENST00000335793 E7ESA3 106 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 SPECC1L-ADORA2AF8WAN1 911 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 MAP3K7O43318 606 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 ALOX15P16050 662 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 SESN2P58004 480 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 CRADDP78560 199 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 PDE1BQ01064 536 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 LRRC36Q1X8D7 754 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 TREML2Q5T2D2 321 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 C1orf146Q5VVC0 180 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 CYLDQ9NQC7 956 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 HESX1Q9UBX0 185 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 SIX4Q9UIU6 781 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZNF180Q9UJW8 692 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 TEX264Q9Y6I9 313 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 DLDP09622 509 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 CDH5P33151 784 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 YWHAZP63104 245 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 PRKD1Q15139 912 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRMT10BQ6PF06 316 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 ACOT1Q86TX2 421 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 PLD5Q8N7P1 536 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 SNX9Q9Y5X1 595 aa17.08■□□□□ 0.32
CDC42EP4-201ENST00000335793 KIAA1217Q5T5P2 1943 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 A0A087WZ62 844 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 SPAG6O75602 509 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 PSMG1O95456 288 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 ICAM3P32942 547 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 STX3Q13277 289 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 AMHR2Q16671 573 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 FDXACB1Q9BRP7 624 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 WWP1Q9H0M0 922 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 CLIC5Q9NZA1 410 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 E7ENQ6 273 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 BOLA2-SMG1P6H3BVE0 249 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 LSM1O15116 133 aaKnown RBP17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 B4GALT4O60513 344 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 TMCC1O94876 653 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 VDRP11473 427 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 GPD2P43304 727 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 GALK1P51570 392 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 GOLGA7BQ2TAP0 167 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 CEP41Q9BYV8 373 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 FETUBQ9UGM5 382 aa17.07■□□□□ 0.32
CDC42EP4-201ENST00000335793 TBX10O75333 385 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 ARIH2O95376 493 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 EPHB1P54762 984 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 SLC34A1Q06495 639 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 LRRC74BQ6ZQY2 392 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CEP70Q8NHQ1 597 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 MZB1Q8WU39 189 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 NLRP7Q8WX94 980 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms