RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FBXO21O94952 628 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SEMA3DO95025 777 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CCNE2O96020 404 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SLC1A6P48664 564 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 GEMP55040 296 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 VPS72Q15906 364 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SNRNP48Q6IEG0 339 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 FOXP4Q8IVH2 680 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 UPB1Q9UBR1 384 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PRPF19Q9UMS4 504 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DENND3A2RUS2 1198 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 KPNA3O00505 521 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ATG7O95352 703 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 IFNA7P01567 189 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 RBP5P82980 135 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ATPIF1Q9UII2 106 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 KIAA1257Q9ULG3 409 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 MAGED2Q9UNF1 606 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 IQGAP1P46940 1657 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 MED24O75448 989 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 REM1O75628 298 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 LDOC1O95751 146 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PRR29P0C7W0 189 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 EIF2AK2P19525 551 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SOAT1P35610 550 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 EIF5AP63241 154 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SPATS1Q496A3 300 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 THEMIS2Q5TEJ8 643 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 BTBD8Q5XKL5 378 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DENND1BQ6P3S1 775 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 AGR3Q8TD06 166 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 GTF3C2Q8WUA4 911 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TATDN2Q93075 761 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SFMBT1Q9UHJ3 866 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 MROH2AA6NES4 1674 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TRIM43BA6NCK2 446 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CNPP09543 421 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 NCAM1P13591 858 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 RPS6P62753 249 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 VAC14Q08AM6 782 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 INTS11Q5TA45 600 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ZBTB33Q86T24 672 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SAMD3Q8N6K7 520 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 NSUN6Q8TEA1 469 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 LSM7Q9UK45 103 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 IQSEC2Q5JU85 1478 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ABCA6Q8N139 1617 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 FESP07332 822 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ACVR2BQ13705 512 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 DSTYKQ6XUX3 929 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 TSEN34Q9BSV6 310 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 GRIP2Q9C0E4 1043 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 CLN6Q9NWW5 311 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 KCNH1O95259 989 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 CLTBP09497 229 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 VCLP18206 1134 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 DCAF6Q58WW2 860 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 FAM120BQ96EK7 910 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ERMAPQ96PL5 475 aaPredicted RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 BTBD9Q96Q07 612 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 APOL2Q9BQE5 337 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 OSBPL6Q9BZF3 934 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 PUS7LQ9H0K6 701 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 NMRAL1Q9HBL8 299 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 SARS2Q9NP81 518 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 F8W810 466 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 MAP2K7O14733 419 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 DDHD2O94830 711 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 CYBBP04839 570 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ASNSP08243 561 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ETFBP38117 255 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 GUCA1AP43080 201 aaPredicted RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 PPIL2Q13356 520 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ATG16L2Q8NAA4 619 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 PJA1Q8NG27 643 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 RP9Q8TA86 221 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ENTPD7Q9NQZ7 604 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 WWOXQ9NZC7 414 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 GGT7Q9UJ14 662 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 SNX7Q9UNH6 387 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 E9PBE3 544 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 TEX33O43247 280 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 CRTAMO95727 393 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 PRLP01236 227 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 BCAMP50895 628 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 KPNA1P52294 538 aaPredicted RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 SNRNP35Q16560 246 aaKnown RBP5.66□□□□□ -1.5
PTPRB-202ENST00000334414 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 AHSPQ9NZD4 102 aa5.66□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF624Q9P2J8 865 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms