RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DPYSL3Q14195 570 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 PIGHQ14442 188 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 HSP90AA5PQ58FG0 334 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ANO5Q75V66 913 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ALDH16A1Q8IZ83 802 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 ABTB1Q969K4 478 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 APOL6Q9BWW8 343 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 KMT5AQ9NQR1 393 aa18.74■□□□□ 0.59
CLSTN3-202ENST00000331148 CXorf49A8MYA2 514 aaPredicted RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 CALB1P05937 261 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 EIF2AK2P19525 551 aaKnown RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 ALDH1A3P47895 512 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 GALK1P51570 392 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 NRLP54845 237 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 DCTN2Q13561 401 aaKnown RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 PGM5Q15124 567 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 SMTNL2Q2TAL5 461 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 TCHHL1Q5QJ38 904 aaPredicted RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 DUS1LQ6P1R4 473 aaKnown RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 GADL1Q6ZQY3 521 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 PPP1R14BQ96C90 147 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 SIKE1Q9BRV8 207 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 Q9H521 79 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 SUDS3Q9H7L9 328 aaPredicted RBP18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 THAP1Q9NVV9 213 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 UBIAD1Q9Y5Z9 338 aa18.73■□□□□ 0.59
CLSTN3-202ENST00000331148 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 A0A0G2JLL6 359 aaPredicted RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 BIRC5O15392 142 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 DNAJA2O60884 412 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 VNN1O95497 513 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 MRPS9P82933 396 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 TMED1Q13445 227 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 SYCP2LQ5T4T6 812 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 ARHGEF16Q5VV41 709 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 ARCQ7LC44 396 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 POLNQ7Z5Q5 900 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 PRRT2Q7Z6L0 340 aaPredicted RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 KBTBD6Q86V97 674 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 HPS6Q86YV9 775 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 NIPA2Q8N8Q9 360 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 DIS3LQ8TF46 1054 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 BSNDQ8WZ55 320 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 ZNF778Q96MU6 729 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 PXMP2Q9NR77 195 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 TELO2Q9Y4R8 837 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 HNRNPDLO14979 420 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 SIN3BO75182 1162 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 AVILO75366 819 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 CD48P09326 243 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 WNT7BP56706 349 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 WDR75Q8IWA0 830 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 MAP7D3Q8IWC1 876 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 MAML3Q96JK9 1138 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 NLRP4Q96MN2 994 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 PDCD2LQ9BRP1 358 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 PCDHGB4Q9UN71 923 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 PCDHGB5Q9Y5G0 923 aa18.72■□□□□ 0.59
CLSTN3-202ENST00000331148 C4BPAP04003 597 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ATP6V1B1P15313 513 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 TNNI1P19237 187 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ITGAXP20702 1163 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 PCSK6P29122 969 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 EIF3EP60228 445 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 CLDN10P78369 228 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 KCNJ11Q14654 390 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 XKR9Q5GH70 373 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 LGSNQ5TDP6 509 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ZNF554Q86TJ5 538 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 DEFB107AQ8IZN7 70 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 EFCAB3Q8N7B9 438 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 APBB2Q92870 758 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 SHCBP1LQ9BZQ2 653 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 STN1Q9H668 368 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ZNF696Q9H7X3 374 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ACAD9Q9H845 621 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 CNTN6Q9UQ52 1028 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ARHGAP10A1A4S6 786 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 TNFAIP8O95379 198 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 MYCLP12524 364 aaPredicted RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 GARTP22102 1010 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 SLC25A11Q02978 314 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 AHI1Q8N157 1196 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 FBXW8Q8N3Y1 598 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 CEP70Q8NHQ1 597 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 ZNF606Q8WXB4 792 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 MAF1Q9H063 256 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 APOBEC2Q9Y235 224 aaKnown RBP18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 DNAJC16Q9Y2G8 782 aa18.71■□□□□ 0.59
CLSTN3-202ENST00000331148 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 TOM1L1O75674 476 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 CRTAMO95727 393 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 HNRNPCP07910 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 SLC5A2P31639 672 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 SERPINB8P50452 374 aa18.7■□□□□ 0.58
CLSTN3-202ENST00000331148 YWHAZP63104 245 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms