RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 TTC19Q6DKK2 380 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 SLC7A14Q8TBB6 771 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 ADAM32Q8TC27 787 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 RTP4Q96DX8 246 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 PKNOX2Q96KN3 472 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 CASD1Q96PB1 797 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 ROPN1BQ9BZX4 212 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 ROPN1Q9HAT0 212 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 ANLNQ9NQW6 1124 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 PRG3Q9Y2Y8 225 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 PTPRDP23468 1912 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 SMIM23A6NLE4 172 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 CAPN9O14815 690 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 RASGRF2O14827 1237 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 ALOX15BO15296 676 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 AMHP03971 560 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 OR4Q2P0C623 313 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 NCAM1P13591 858 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 HPDP32754 393 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 IFI35P80217 286 aaPredicted RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 MAPRE1Q15691 268 aaKnown RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 TNFAIP8L3Q5GJ75 292 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 CEP128Q6ZU80 1094 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 SCML4Q8N228 414 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 IRGQQ8WZA9 623 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 OGDHLQ9ULD0 1010 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 GOLGA8MH3BSY2 632 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 I6L893 689 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 NDC80O14777 642 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 KCNN4O15554 427 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 ZFXP17010 805 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 ADRA1BP35368 520 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 FASTKD3Q14CZ7 662 aaKnown RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 NCBP2-AS2Q69YL0 99 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 CRIPAKQ8N1N5 446 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 SCAMP5Q8TAC9 235 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 EDEM1Q92611 657 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 PGAP3Q96FM1 320 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 FAM193BQ96PV7 902 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 ZCWPW1Q9H0M4 648 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 RCOR3Q9P2K3 495 aaPredicted RBP17.59■□□□□ 0.41
DDX41-201ENST00000330503 PCDHB7Q9Y5E2 793 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 TET1Q8NFU7 2136 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 LONRF1Q17RB8 773 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 FNBP1LQ5T0N5 605 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 BSPRYQ5W0U4 402 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 CROCCP2Q86T23 111 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 SEPT8Q92599 483 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 PNPLA8Q9NP80 782 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 ARHGEF4Q9NR80 690 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 FBXW11Q9UKB1 542 aa17.59■□□□□ 0.41
DDX41-201ENST00000330503 COL4A4P53420 1690 aaPredicted RBP17.58■□□□□ 0.41
DDX41-201ENST00000330503 TNFRSF10BO14763 440 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 RGS16O15492 202 aaPredicted RBP17.58■□□□□ 0.4
DDX41-201ENST00000330503 PQBP1O60828 265 aaKnown RBP17.58■□□□□ 0.4
DDX41-201ENST00000330503 TADA2AO75478 443 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 TCEA3O75764 348 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 TMEM63AO94886 807 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 CCL5P13501 91 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 ARL4AP40617 200 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 NR2C2P49116 596 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 PPP2R2AP63151 447 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 GNGT1P63211 74 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 XRCC4Q13426 336 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 MSS51Q4VC12 460 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.4
DDX41-201ENST00000330503 MFSD5Q6N075 450 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 LRRC31Q6UY01 552 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 SPATA2LQ8IUW3 424 aaPredicted RBP17.58■□□□□ 0.4
DDX41-201ENST00000330503 RNF139Q8WU17 664 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 DTLQ9NZJ0 730 aa17.58■□□□□ 0.4
DDX41-201ENST00000330503 CFAP69A5D8W1 941 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 FAM72CH0Y354 149 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 BANF1O75531 89 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 ACTN2P35609 894 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 GUCY1A3Q02108 690 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 FAM72AQ5TYM5 149 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 FAM72DQ6L9T8 149 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 FAM72BQ86X60 149 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 CCDC33Q8N5R6 958 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 NTAN1Q96AB6 310 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 RRN3Q9NYV6 651 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 SLC12A6Q9UHW9 1150 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 DGKIO75912 1065 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 ABHD2P08910 425 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 MDH1P40925 334 aaKnown RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 PPARDQ03181 441 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 SCAPQ12770 1279 aa17.57■□□□□ 0.4
DDX41-201ENST00000330503 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
DDX41-201ENST00000330503 SLC45A4Q5BKX6 768 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms