RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PPP1R18Q6NYC8 613 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 DSG4Q86SJ6 1040 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ZNF598Q86UK7 904 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ELMOD2Q8IZ81 293 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PQLC1Q8N2U9 271 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 TRUB1Q8WWH5 349 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ATL1Q8WXF7 558 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SLC35C1Q96A29 364 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ZNF641Q96N77 438 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 VPS35Q96QK1 796 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 WRNIP1Q96S55 665 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 MROQ9BYG7 248 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SLC2A11Q9BYW1 496 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 TRIT1Q9H3H1 467 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 C12orf10Q9HB07 376 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ACP6Q9NPH0 428 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ST14Q9Y5Y6 855 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.455e-8■■■■■ 37.4
SHMT2-201ENST00000328923 LRRC37AA6NMS7 1700 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 USP17L3A6NCW0 530 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 USP17L4A6NCW7 530 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 H3BMQ9 156 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 H3BUI4 141 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 GIPC1O14908 333 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SGO2Q562F6 1265 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 AARS2Q5JTZ9 985 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ANKRD26P1Q6NSI1 321 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 USP17L1Q7RTZ2 530 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 GLRX5Q86SX6 157 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 LINC00469Q8N7U9 141 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 JADE3Q92613 823 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 COG8Q96MW5 612 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SLC29A1Q99808 456 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PLEKHA5Q9HAU0 1116 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 VPS45Q9NRW7 570 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 TMEM260Q9NX78 707 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 STK39Q9UEW8 545 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 SNTNA6NMZ2 147 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 PRR5-ARHGAP8B1AHC4 643 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 E5RJQ4 531 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 TAF4O00268 1085 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 ALX3O95076 343 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 KLHL2O95198 593 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 IL1R1P14778 569 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 PRKACAP17612 351 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 BASP1P80723 227 aaKnown RBP12.23□□□□□ -0.45
SHMT2-201ENST00000328923 ARHGAP8P85298 464 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 CARTPTQ16568 116 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-201ENST00000328923 BTLAQ7Z6A9 289 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 COMMD8Q9NX08 183 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 B3GNT3Q9Y2A9 372 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 ALG6Q9Y672 507 aa12.23□□□□□ -0.45
SHMT2-201ENST00000328923 C1orf232A0A0U1RR37 186 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 GSTO1P78417 241 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 CAV1Q03135 178 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-201ENST00000328923 SCARA3Q6AZY7 606 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 GALNT18Q6P9A2 607 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 SLC30A10Q6XR72 485 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 SYDE1Q6ZW31 735 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-201ENST00000328923 LYSMD3Q7Z3D4 306 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-201ENST00000328923 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 C7orf57Q8NEG2 295 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 HAS1Q92839 578 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 KLQ9UEF7 1012 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 POMPQ9Y244 141 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 CROCCQ5TZA2 2017 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 SYCE1LA8MT33 242 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 GOLGA8MH3BSY2 632 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 MSI1O43347 362 aaKnown RBP12.22□□□□□ -0.45
SHMT2-201ENST00000328923 SCO2O43819 266 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 AKAP3O75969 853 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 MTA2O94776 668 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 H6PDO95479 791 aa12.22□□□□□ -0.45
SHMT2-201ENST00000328923 KRT10P13645 584 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms