RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TUBGCP4Q9UGJ1 667 aa14.55□□□□□ -0.08
ATP2C1-201ENST00000328560 ITGA11Q9UKX5 1188 aa14.55□□□□□ -0.08
ATP2C1-201ENST00000328560 H3BRJ5 948 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 GSC2O15499 205 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 KRT36O76013 467 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 KRT38O76015 456 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 ADCYAP1R1P41586 468 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 ALDH18A1P54886 795 aaKnown RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 SLC10A2Q12908 348 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 ZNF484Q5JVG2 852 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 C4orf50Q6ZRC1 276 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 FAM131BQ86XD5 332 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 IL1RAPL1Q9NZN1 696 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 POLR2AP24928 1970 aaKnown RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 B2RBV5 119 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 TSPAN1O60635 241 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 DHRS4L1P0CG22 281 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 TGM2P21980 687 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 PPIL2Q13356 520 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 HEATR6Q6AI08 1181 aaKnown RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 SPDL1Q96EA4 605 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 TAS2R1Q9NYW7 299 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 KLK14Q9P0G3 267 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 PLLPQ9Y342 182 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 MCM3APO60318 1980 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 TSHRP16473 764 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 AQP5P55064 265 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 SLC8A3P57103 927 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 SNAPC2Q13487 334 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 CHSY1Q86X52 802 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 CCNYQ8ND76 341 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 STMN2Q93045 179 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 AP4E1Q9UPM8 1137 aa14.54□□□□□ -0.08
ATP2C1-201ENST00000328560 PGM1P36871 562 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 ARHGAP1Q07960 439 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 WASHC2DQ5SRD0 308 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 GPRC5AQ8NFJ5 357 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 FAM161BQ96MY7 647 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 ZMAT2Q96NC0 199 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 LGMNQ99538 433 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 TRIM6Q9C030 488 aaPredicted RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 MYO18AQ92614 2054 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 WDR27A2RRH5 827 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 GABBR2O75899 941 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 MYCNP04198 464 aaPredicted RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 GNAZP19086 355 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 AKAP5P24588 427 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 INCA1Q0VD86 236 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 CES3Q6UWW8 571 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 SH2D5Q6ZV89 423 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 SMC1BQ8NDV3 1235 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 PLAC1Q9HBJ0 212 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 H3BRB1 525 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 RFPL1O75677 317 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 CRLF3Q8IUI8 442 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 CCDC185Q8N715 623 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 WDR60Q8WVS4 1066 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.082e-6■■■□□ 16.8
ATP2C1-201ENST00000328560 SKA1Q96BD8 255 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 TUT1Q9H6E5 874 aaKnown RBP14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 TMPRSS4Q9NRS4 437 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 KIAA1257Q9ULG3 409 aa14.53□□□□□ -0.08
ATP2C1-201ENST00000328560 BCLAF3A2AJT9 711 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 GOT1P17174 413 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 AP1B1Q10567 949 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 THOC5Q13769 683 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 ACSBG2Q5FVE4 666 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 NME8Q8N427 588 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 FBXO27Q8NI29 283 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 GSDMBQ8TAX9 411 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 PTCD3Q96EY7 689 aaKnown RBP14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 ATXN7L3BQ96GX2 97 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 PGLYRP2Q96PD5 576 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 DCLRE1BQ9H816 532 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 SLC24A3Q9HC58 644 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 SETD4Q9NVD3 440 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 LNPEPQ9UIQ6 1025 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 NME7Q9Y5B8 376 aa14.52□□□□□ -0.08
ATP2C1-201ENST00000328560 TRAFD1O14545 582 aaPredicted RBP14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 CAPN9O14815 690 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 F7P08709 466 aaPredicted RBP14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 GMPRP36959 345 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 SLC9A4Q6AI14 798 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 MTHFD1LQ6UB35 978 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 TEX9Q8N6V9 391 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 MAB21L3Q8N8X9 362 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 EBNA1BP2Q99848 306 aaKnown RBP14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 EIF2AQ9BY44 585 aaKnown RBP14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 VRTNQ9H8Y1 702 aa14.52□□□□□ -0.09
ATP2C1-201ENST00000328560 C2CD2Q9Y426 696 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms