RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 AGPAT5Q9NUQ2 364 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 HEY2Q9UBP5 337 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 APBA3O96018 575 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 NME3Q13232 169 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MFSD14CQ5VZR4 134 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 BTBD8Q5XKL5 378 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SCARA3Q6AZY7 606 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TWF2Q6IBS0 349 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 KIAA0408Q6ZU52 694 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CDK20Q8IZL9 346 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ROBO2Q9HCK4 1378 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 UBA6A0AVT1 1052 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 EXTL3O43909 919 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FCER1AP12319 257 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 POLR2EP19388 210 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 TMEM44Q2T9K0 475 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 USP39Q53GS9 565 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 ARMC4Q5T2S8 1044 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RPRD1AQ96P16 312 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 TRIM51Q9BSJ1 452 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PSME2Q9UL46 239 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SCN3AQ9NY46 2000 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RPS12P25398 132 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 POU4F1Q01851 419 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 SLC34A1Q06495 639 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 EXOC3L1Q86VI1 746 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ASCC3Q8N3C0 2202 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 CCDC154A6NI56 674 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PSMD12O00232 456 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 IFRD1O00458 451 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 NEMP1O14524 444 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 VPS26AO75436 327 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 UBXN2AP68543 259 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 TNFAIP8L3Q5GJ75 292 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 MZT2AQ6P582 158 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 UBE2R2Q712K3 238 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 DCP1BQ8IZD4 617 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 KCTD5Q9NXV2 234 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 C3orf18Q9UK00 162 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 IQSEC2Q5JU85 1478 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ITGA10O75578 1167 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 HTR7P34969 479 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 OSTNP61366 133 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 GPSM2P81274 684 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 KCNMA1Q12791 1236 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 XRCC4Q13426 336 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ANKMY2Q8IV38 441 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 HEXDCQ8WVB3 486 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 SESN2P58004 480 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 PLIN5Q00G26 463 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 B3GNT6Q6ZMB0 384 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NEDD1Q8NHV4 660 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 INTS13Q9NVM9 706 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 TRHDEQ9UKU6 1024 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 TNS3Q68CZ2 1445 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 Q3C1V9 767 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 INO80DQ53TQ3 878 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 PDZK1Q5T2W1 519 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 TTC23Q5W5X9 447 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 FEZF2Q8TBJ5 459 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 B3GALT6Q96L58 329 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ALG13Q9NP73 1137 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 MYRFQ9Y2G1 1151 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 H7C4K7 107 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 CYP1A1P04798 512 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 CACNA2D1P54289 1103 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 POLR2LP62875 67 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 ZBTB49Q6ZSB9 765 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 CHERPQ8IWX8 916 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 C4orf33Q8N1A6 199 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 DYNLL2Q96FJ2 89 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PIH1D3Q9NQM4 214 aaKnown RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 TMX2Q9Y320 296 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PTPRZ1P23471 2315 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 KIF28PB7ZC32 967 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 RGS20O76081 388 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 POLD3Q15054 466 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 ARID3BQ8IVW6 561 aaPredicted RBP6.5□□□□□ -1.37
SSH1-202ENST00000326495 PM20D2Q8IYS1 436 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 CCDC24Q8N4L8 307 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 NKX2-3Q8TAU0 364 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 CASKIN2Q8WXE0 1202 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 SKA1Q96BD8 255 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 KIF12Q96FN5 646 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 TBC1D13Q9NVG8 400 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 GMIPQ9P107 970 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 F5P12259 2224 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 REM1O75628 298 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ZNF23P17027 643 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 RPA1P27694 616 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 DCKP27707 260 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 PTENP60484 403 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
SSH1-202ENST00000326495 RASA2Q15283 850 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 ACAD10Q6JQN1 1059 aa6.5□□□□□ -1.37
SSH1-202ENST00000326495 FBXO42Q6P3S6 717 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms