RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 DFFAO00273 331 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 MFSD11O43934 449 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 ITGAVP06756 1048 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
CUL4A-201ENST00000326335 CXCR3P49682 368 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 CAV1Q03135 178 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 TAP1Q03518 808 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
CUL4A-201ENST00000326335 KBTBD7Q8WVZ9 684 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 NRDE2Q9H7Z3 1164 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 KLC4Q9NSK0 619 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 UBQLN1Q9UMX0 589 aaKnown RBP11.04□□□□□ -0.64
CUL4A-201ENST00000326335 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 NEBLO76041 1014 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 ITGB1P05556 798 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 IL4RP24394 825 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 CRHR2Q13324 411 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 GRB14Q14449 540 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 BHMTQ93088 406 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 KATNBL1Q9H079 304 aa11.04□□□□□ -0.64
CUL4A-201ENST00000326335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.04□□□□□ -0.64
CUL4A-201ENST00000326335 NT5C1B-RDH14C9J2C7 533 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 ERVK-10P10266 1014 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 TAC1P20366 129 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 MGAT1P26572 445 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 PSMB4P28070 264 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 SYDE1Q6ZW31 735 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 FAM228AQ86W67 206 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 AGGF1Q8N302 714 aaeCLIP11.03□□□□□ -0.646e-10■■■■■ 30.6
CUL4A-201ENST00000326335 SPATA6LQ8N4H0 392 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 PRR11Q96HE9 360 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 ROPN1BQ9BZX4 212 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 ROPN1Q9HAT0 212 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 SFMBT1Q9UHJ3 866 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 FIS1Q9Y3D6 152 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 C2CD2Q9Y426 696 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 NRCAMQ92823 1304 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 A6NNZ2 444 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 C9IYK1 514 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 GJA9P57773 515 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 PDE1BQ01064 536 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 BST2Q10589 180 aaKnown RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 TCEAL1Q15170 157 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 TUBB8Q3ZCM7 444 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 CDHR3Q6ZTQ4 885 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 POLNQ7Z5Q5 900 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 FUKQ8N0W3 1084 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 RFWD2Q8NHY2 731 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 VPS11Q9H270 941 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 PRDM12Q9H4Q4 367 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
CUL4A-201ENST00000326335 ABI2Q9NYB9 513 aaPredicted RBP11.03□□□□□ -0.64
CUL4A-201ENST00000326335 MDM4O15151 490 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 EPHB2P29323 1055 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 FLT3LGP49771 235 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 PCSK7Q16549 785 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 KIAA0319Q5VV43 1072 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 CYB5D1Q6P9G0 228 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 MTDHQ86UE4 582 aaKnown RBP11.02□□□□□ -0.64
CUL4A-201ENST00000326335 TTC13Q8NBP0 860 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.64
CUL4A-201ENST00000326335 SLC35F5Q8WV83 523 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.64
CUL4A-201ENST00000326335 RILPQ96NA2 401 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 PIGVQ9NUD9 493 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 ZNF358Q9NW07 568 aa11.02□□□□□ -0.64
CUL4A-201ENST00000326335 DNAJC6O75061 913 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 PTPN1P18031 435 aaKnown RBP11.02□□□□□ -0.65
CUL4A-201ENST00000326335 ATICP31939 592 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 GTF2A1P52655 376 aaPredicted RBP11.02□□□□□ -0.65
CUL4A-201ENST00000326335 TMPRSS15P98073 1019 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 ITKQ08881 620 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 PPM1JQ5JR12 505 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 NDUFAF2Q8N183 169 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 NAT8LQ8N9F0 302 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 COLGALT1Q8NBJ5 622 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 CKAP2Q8WWK9 683 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 CCT6BQ92526 530 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 CPSF2Q9P2I0 782 aaKnown RBP11.02□□□□□ -0.65
CUL4A-201ENST00000326335 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 PTPRFP10586 1907 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 PARP14Q460N5 1801 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 COPEO14579 308 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 PTGESO14684 152 aa11.02□□□□□ -0.65
CUL4A-201ENST00000326335 ALOX15BO15296 676 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms