RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 GSDMBQ8TAX9 411 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 SIKE1Q9BRV8 207 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 GCOM2Q9BZD3 368 aaPredicted RBP20.59■□□□□ 0.89
SOX2-201ENST00000325404 FBXO6Q9NRD1 293 aaPredicted RBP20.59■□□□□ 0.89
SOX2-201ENST00000325404 CAPN14A8MX76 684 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 GJB1P08034 283 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 NR2C2P49116 596 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 MRPS5P82675 430 aaKnown RBP20.59■□□□□ 0.89
SOX2-201ENST00000325404 SLC6A3Q01959 620 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 TRAPPC12Q8WVT3 735 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 EBNA1BP2Q99848 306 aaKnown RBP20.59■□□□□ 0.89
SOX2-201ENST00000325404 WWP1Q9H0M0 922 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 XAB2Q9HCS7 855 aaKnown RBP20.59■□□□□ 0.89
SOX2-201ENST00000325404 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
SOX2-201ENST00000325404 CXorf49A8MYA2 514 aaPredicted RBP20.58■□□□□ 0.89
SOX2-201ENST00000325404 F8W8V4 182 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 SDC4P31431 198 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 TEX44Q53QW1 395 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 RINLQ6ZS11 566 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 ARCQ7LC44 396 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 TMPRSS6Q8IU80 811 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 LINC01465Q8N7H1 131 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 ZNF333Q96JL9 665 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 SIGLEC10Q96LC7 697 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 ZFATQ9P243 1243 aa20.58■□□□□ 0.89
SOX2-201ENST00000325404 ZSWIM8A7E2V4 1837 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 SNNO75324 88 aaPredicted RBP20.58■□□□□ 0.88
SOX2-201ENST00000325404 PAX7P23759 505 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 BST1Q10588 318 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 ZRSR2Q15696 482 aaKnown RBP20.58■□□□□ 0.88
SOX2-201ENST00000325404 ANO7Q6IWH7 933 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 UNC5AQ6ZN44 842 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 SESTD1Q86VW0 696 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 FAM172AQ8WUF8 416 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 VTA1Q9NP79 307 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 ERAP1Q9NZ08 941 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 STX18Q9P2W9 335 aaKnown RBP20.58■□□□□ 0.88
SOX2-201ENST00000325404 SORCS3Q9UPU3 1222 aa20.58■□□□□ 0.88
SOX2-201ENST00000325404 NVLO15381 856 aaKnown RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 APRTP07741 180 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 SLC34A1Q06495 639 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 SMC1BQ8NDV3 1235 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 SNRNP25Q9BV90 132 aaKnown RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 NRDE2Q9H7Z3 1164 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 DPP3Q9NY33 737 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 FAM237BA0A1B0GVD1 139 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 PSMG1O95456 288 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 SCNN1AP37088 669 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 PTPN9P43378 593 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 TMPRSS15P98073 1019 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 LBRQ14739 615 aaKnown RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 RAB6CQ53S08 254 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 ACSBG2Q5FVE4 666 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 APBB1IPQ7Z5R6 666 aaPredicted RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 ZNF467Q7Z7K2 595 aaPredicted RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 NUDCD3Q8IVD9 361 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 CCDC110Q8TBZ0 833 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 MICAL1Q8TDZ2 1067 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 KHSRPQ92945 711 aaKnown RBP eCLIP20.57■□□□□ 0.88
SOX2-201ENST00000325404 PIWIL1Q96J94 861 aaKnown RBP20.57■□□□□ 0.88
SOX2-201ENST00000325404 PTPN18Q99952 460 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 NMUR2Q9GZQ4 415 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 RAB6CQ9H0N0 254 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 PRDM16Q9HAZ2 1276 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 ARHGEF4Q9NR80 690 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 SMYD2Q9NRG4 433 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 PCDHA11Q9Y5I1 949 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 HEY1Q9Y5J3 304 aa20.57■□□□□ 0.88
SOX2-201ENST00000325404 H0Y3Z8 333 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 CCDC6Q16204 474 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 DPYSL2Q16555 572 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 CDO1Q16878 200 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 FAM110CQ1W6H9 321 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 GOLGA7BQ2TAP0 167 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 ACMSDQ8TDX5 336 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 SPDL1Q96EA4 605 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 OSBPL1AQ9BXW6 950 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 ZNF212Q9UDV6 495 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 BPGMP07738 259 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 WASHC5Q12768 1159 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 KPNB1Q14974 876 aaKnown RBP20.56■□□□□ 0.88
SOX2-201ENST00000325404 KYAT3Q6YP21 454 aaKnown RBP20.56■□□□□ 0.88
SOX2-201ENST00000325404 ZNF534Q76KX8 674 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 GPR142Q7Z601 462 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 CRLF3Q8IUI8 442 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 PRR11Q96HE9 360 aaPredicted RBP20.56■□□□□ 0.88
SOX2-201ENST00000325404 ZNF668Q96K58 619 aaPredicted RBP20.56■□□□□ 0.88
SOX2-201ENST00000325404 NGRNQ9NPE2 291 aaKnown RBP20.56■□□□□ 0.88
SOX2-201ENST00000325404 PLXNB2O15031 1838 aa20.56■□□□□ 0.88
SOX2-201ENST00000325404 MLNP12872 115 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 SEMA5AQ13591 1074 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 RCN1Q15293 331 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 MUM1Q2TAK8 710 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 HSF5Q4G112 596 aaPredicted RBP20.55■□□□□ 0.88
SOX2-201ENST00000325404 STEAP4Q687X5 459 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 TAPT1Q6NXT6 567 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 SCYL2Q6P3W7 929 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 DPP9Q86TI2 863 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 ARMC2Q8NEN0 867 aa20.55■□□□□ 0.88
SOX2-201ENST00000325404 SLC35F5Q8WV83 523 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms