RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	NT5M	Q9NPB1	228 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	HACD3	Q9P035	362 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	SLC27A5	Q9Y2P5	690 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	SDR42E2	A6NKP2	422 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	PFDN6	O15212	129 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	B4GALT4	O60513	344 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	TRUB2	O95900	331 aa	Known RBP	12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	SETSIP	P0DME0	302 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	TCN1	P20061	433 aa	Predicted RBP	12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	KCNA4	P22459	653 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	ZNF143	P52747	638 aa	Predicted RBP	12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	RGMB	Q6NW40	437 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	TSHZ1	Q6ZSZ6	1077 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	TAS1R3	Q7RTX0	852 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	PYROXD2	Q8N2H3	581 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	ERLEC1	Q96DZ1	483 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	PCYT2	Q99447	389 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	THTPA	Q9BU02	230 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	IRAK4	Q9NWZ3	460 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	VANGL2	Q9ULK5	521 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	IPP	Q9Y573	584 aa		12.21	□□□□□ -0.45
DDR1-223	ENST00000324771	GOLGA8Q	A0A0J9YX86	632 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771		A0A1W2PPM1	405 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	GOLGA8O	A6NCC3	632 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771		B2RBV5	119 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	GOLGA8N	F8WBI6	632 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	DARS	P14868	501 aa	Known RBP	12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	NDUFV1	P49821	464 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	PAPOLA	P51003	745 aa	Known RBP	12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	VEPH1	Q14D04	833 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	SPRYD7	Q5W111	196 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	PLEKHA7	Q6IQ23	1121 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	CTU1	Q7Z7A3	348 aa	Known RBP	12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	EXOC3L1	Q86VI1	746 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	SLC4A11	Q8NBS3	891 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	STKLD1	Q8NE28	680 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	CD248	Q9HCU0	757 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	SLC40A1	Q9NP59	571 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	MYH1	P12882	1939 aa		12.21	□□□□□ -0.46
DDR1-223	ENST00000324771	LTF	P02788	710 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	GFAP	P14136	432 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	LHX1	P48742	406 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	CUL3	Q13618	768 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SH3TC2	Q8TF17	1288 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	RNF157	Q96PX1	679 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	NDFIP2	Q9NV92	336 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SHOC2	Q9UQ13	582 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	COQ4	Q9Y3A0	265 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SLC15A5	A6NIM6	579 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	C22orf31	O95567	290 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ERVK-10	P10266	1014 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	RPA3	P35244	121 aa	Predicted RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	DBN1	Q16643	649 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	FAM110C	Q1W6H9	321 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	LAYN	Q6UX15	382 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	NLRP9	Q7RTR0	991 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	STRA8	Q7Z7C7	330 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	MTDH	Q86UE4	582 aa	Known RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	LONP2	Q86WA8	852 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	RASGEF1C	Q8N431	466 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	PIK3R5	Q8WYR1	880 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ASIC4	Q96FT7	647 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	DDX27	Q96GQ7	796 aa	Known RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	XAB2	Q9HCS7	855 aa	Known RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ARHGEF38	Q9NXL2	777 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ADA2	Q9NZK5	511 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	MYH7	P12883	1935 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771		E5RI56	91 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	CHUK	O15111	745 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SKAP2	O75563	359 aa	Predicted RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	HOXC6	P09630	235 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	PSMB4	P28070	264 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SPR	P35270	261 aa	Predicted RBP	12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	PGM1	P36871	562 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	DDIAS	Q8IXT1	998 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	GLIS1	Q8NBF1	620 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	SLC26A7	Q8TE54	656 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	FICD	Q9BVA6	458 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	CDHR5	Q9HBB8	845 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ACSS2	Q9NR19	701 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	ARMCX1	Q9P291	453 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	TRPV2	Q9Y5S1	764 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	MYH15	Q9Y2K3	1946 aa		12.2	□□□□□ -0.46
DDR1-223	ENST00000324771	TBKBP1	A7MCY6	615 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	AIM2	O14862	343 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	CILP	O75339	1184 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	TUB	P50607	506 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	IL1RL1	Q01638	556 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	DDR2	Q16832	855 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ANKRD20A8P	Q5CZ79	823 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ILDR2	Q71H61	639 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SLC26A11	Q86WA9	606 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	PPHLN1	Q8NEY8	458 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	TMEM169	Q96HH4	297 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	VCX3B	Q9H321	246 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SFMBT1	Q9UHJ3	866 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	C2CD2	Q9Y426	696 aa		12.19	□□□□□ -0.46

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