RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SLC44A2Q8IWA5 706 aaPredicted RBP17.33■□□□□ 0.36
SMCHD1-201ENST00000320876 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PLA2G6O60733 806 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ODC1P11926 461 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF284Q2VY69 593 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 SLC25A24Q6NUK1 477 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 CLVS1Q8IUQ0 354 aaPredicted RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF513Q8N8E2 541 aaPredicted RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ADGRE3Q9BY15 652 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 SAR1AQ9NR31 198 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 CCDC130P13994 396 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 BGNP21810 368 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PEG10Q86TG7 708 aaKnown RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 TMEM132CQ8N3T6 1108 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 SLC20A1Q8WUM9 679 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ELOVL6Q9H5J4 265 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 C17orf75Q9HAS0 396 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 RAD18Q9NS91 495 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 TBX20Q9UMR3 447 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 TSPAN19P0C672 248 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 YWHAQP27348 245 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PAPD7Q5XG87 772 aaKnown RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 TTC27Q6P3X3 843 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 RIPOR1Q6ZS17 1223 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 FNIP1Q8TF40 1166 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 VMP1Q96GC9 406 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 SYNDIG1Q9H7V2 258 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 H3BMM5 538 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PCNAP12004 261 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 C10orf120Q5SQS8 335 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ZDHHC13Q8IUH4 622 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 GPRASP2Q96D09 838 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 MYLK2Q9H1R3 596 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 KLHL28Q9NXS3 571 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PLEKP08567 350 aaPredicted RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 CNOT7Q9UIV1 285 aaKnown RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 HOXD10P28358 340 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 B3GALNT2Q8NCR0 500 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 HS6ST1O60243 411 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PRKAA1Q13131 559 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ZC2HC1CQ53FD0 456 aaPredicted RBP17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 TMEM63BQ5T3F8 832 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF605Q86T29 641 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 POLR1BQ9H9Y6 1135 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 CAPN10Q9HC96 672 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 ENTPD7Q9NQZ7 604 aa17.32■□□□□ 0.36
SMCHD1-201ENST00000320876 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 CLOCKO15516 846 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 IRF1P10914 325 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 IRGCQ6NXR0 463 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 TPD52L3Q96J77 140 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 SEPHS2Q99611 448 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 SYNCRIPO60506 623 aaKnown RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 LCA5LO95447 670 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 NEDD1Q8NHV4 660 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 ADI1Q9BV57 179 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 HMBSP08397 361 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 RCVRNP35243 200 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 OTUD3Q5T2D3 398 aaPredicted RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 OR7A2PQ8NGA2 310 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 STK32AQ8WU08 396 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 NSMCE2Q96MF7 247 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 CPA3P15088 417 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 HPCAL1P37235 193 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 PRKCEQ02156 737 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 LGALS3BPQ08380 585 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 MZT2AQ6P582 158 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 EPHB2P29323 1055 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 SLFN11Q7Z7L1 901 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 CENPIQ92674 756 aaPredicted RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 NUAK2Q9H093 628 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 GANQ9H2C0 597 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 PRMT7Q9NVM4 692 aaPredicted RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 METP08581 1390 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 CNPP09543 421 aaKnown RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 GSTT1P30711 240 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 PIF1Q9H611 641 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 TRIM39Q9HCM9 518 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 DYRK1BQ9Y463 629 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 LSM8O95777 96 aaKnown RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 SFSWAPQ12872 951 aaKnown RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 FASTKQ14296 549 aaKnown RBP17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 APOPT1Q96IL0 206 aa17.31■□□□□ 0.36
SMCHD1-201ENST00000320876 H3BN98 237 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 CHN2P52757 468 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 DCP1BQ8IZD4 617 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 EPB41L4BQ9H329 900 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 EHD3Q9NZN3 535 aa17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 DDX39BQ13838 428 aaKnown RBP17.3■□□□□ 0.36
SMCHD1-201ENST00000320876 RNASE11Q8TAA1 199 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms