RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 CEP70Q8NHQ1 597 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 DTNBP1Q96EV8 351 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 GRIP2Q9C0E4 1043 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 JPH1Q9HDC5 661 aaPredicted RBP16.6■□□□□ 0.25
CRAT-201ENST00000318080 ADGRA2Q96PE1 1338 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 VILLO15195 856 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 SERPINB6P35237 376 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 MSX2P35548 267 aaPredicted RBP16.6■□□□□ 0.25
CRAT-201ENST00000318080 PDK3Q15120 406 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 CHI3L2Q15782 390 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 NET1Q7Z628 596 aaPredicted RBP16.6■□□□□ 0.25
CRAT-201ENST00000318080 RSPH3Q86UC2 560 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 METTL25Q8N6Q8 603 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 NIPA2Q8N8Q9 360 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 DEPTORQ8TB45 409 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
CRAT-201ENST00000318080 LENG1Q96BZ8 264 aaPredicted RBP16.6■□□□□ 0.25
CRAT-201ENST00000318080 CPXM1Q96SM3 734 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 APPL1Q9UKG1 709 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 POLIQ9UNA4 740 aa16.6■□□□□ 0.25
CRAT-201ENST00000318080 LOC100653049A0A140TA62 436 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 WDR46O15213 610 aaKnown RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 LYPLA1O75608 230 aaPredicted RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 KRT34O76011 436 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 PSAPP07602 524 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 PABPC4LP0CB38 370 aaKnown RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 CD19P15391 556 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 CDH8P55286 799 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 PPP6R3Q5H9R7 873 aaPredicted RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 ABHD15Q6UXT9 468 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 PEBP4Q96S96 227 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 SLX1AQ9BQ83 275 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 S100A14Q9HCY8 104 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 CSADQ9Y600 493 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 SCN4AP35499 1836 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 A0A0J9YVX5 310 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 MIPP30301 263 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 PSMC1P62191 440 aaKnown RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 DARS2Q6PI48 645 aaKnown RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 C1orf228Q6PIY5 440 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 DHDDSQ86SQ9 333 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 LIN28AQ9H9Z2 209 aaKnown RBP16.59■□□□□ 0.25
CRAT-201ENST00000318080 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 TTLL3Q9Y4R7 772 aa16.59■□□□□ 0.25
CRAT-201ENST00000318080 MAGEC1O60732 1142 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 ATG7O95352 703 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 GMPRP36959 345 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 OSTNP61366 133 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 FSTL1Q12841 308 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 C6orf163Q5TEZ5 329 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 IYDQ6PHW0 289 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 ACAD11Q709F0 780 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.25
CRAT-201ENST00000318080 ARHGAP24Q8N264 748 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 FAM172AQ8WUF8 416 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 APOL6Q9BWW8 343 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 KLHL4Q9C0H6 718 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 NXF1Q9UBU9 619 aaKnown RBP16.58■□□□□ 0.25
CRAT-201ENST00000318080 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 PLLPQ9Y342 182 aa16.58■□□□□ 0.25
CRAT-201ENST00000318080 RFPL1O75677 317 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 ERBB2P04626 1255 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 ENPEPQ07075 957 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 CCNIQ14094 377 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 TRMT5Q32P41 509 aaKnown RBP16.58■□□□□ 0.24
CRAT-201ENST00000318080 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
CRAT-201ENST00000318080 POLNQ7Z5Q5 900 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 CCDC33Q8N5R6 958 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
CRAT-201ENST00000318080 RAB6BQ9NRW1 208 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 TAGLN3Q9UI15 199 aa16.58■□□□□ 0.24
CRAT-201ENST00000318080 WDR81Q562E7 1941 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 LSM8O95777 96 aaKnown RBP16.57■□□□□ 0.24
CRAT-201ENST00000318080 SMIM18P0DKX4 95 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 UQCRBP14927 111 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 CCND2P30279 289 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 GJA5P36382 358 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 CD151P48509 253 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 YWHAZP63104 245 aaKnown RBP16.57■□□□□ 0.24
CRAT-201ENST00000318080 KCNJ11Q14654 390 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 TRMT10BQ6PF06 316 aaKnown RBP16.57■□□□□ 0.24
CRAT-201ENST00000318080 KLHDC10Q6PID8 442 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 HPS6Q86YV9 775 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 LPAR1Q92633 364 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 E2F7Q96AV8 911 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 FAF2Q96CS3 445 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 PORCNQ9H237 461 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 UBAP1Q9NZ09 502 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
CRAT-201ENST00000318080 WDR90Q96KV7 1748 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 C15orf38-AP3S2A0A0A6YYH1 394 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 HMX2A2RU54 273 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 CSH1P0DML2 217 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 CSH2P0DML3 217 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
CRAT-201ENST00000318080 HPCAP84074 193 aa16.57■□□□□ 0.24
CRAT-201ENST00000318080 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms