RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 IRX4P78413 519 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 IGSF11Q5DX21 431 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 IYDQ6PHW0 289 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 JAMLQ86YT9 394 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ADGRF4Q8IZF3 695 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TBC1D15Q8TC07 691 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 METTL2AQ96IZ6 378 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CFAP57Q96MR6 1250 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ZDHHC15Q96MV8 337 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 WDR11Q9BZH6 1224 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SNX24Q9Y343 169 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PCDHB4Q9Y5E5 795 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TNS1Q9HBL0 1735 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MYOCOSA0A1B0GUC4 107 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TRAF5O00463 557 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DNAJA2O60884 412 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GPC4O75487 556 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TM7SF2O76062 418 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TDP2O95551 362 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 NR2F2P24468 414 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PRDX6P30041 224 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ARL1P40616 181 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 ALDH3B2P48448 385 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GRM1Q13255 1194 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 OXA1LQ15070 435 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TRIP10Q15642 601 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 LSM12Q3MHD2 195 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TDRD12Q587J7 1177 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 AGAP7PQ5VUJ5 663 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 XRRA1Q6P2D8 792 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 FRA10AC1Q70Z53 315 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 GPBP1Q86WP2 473 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 POU5F2Q8N7G0 328 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TERB1Q8NA31 727 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TMIGD2Q96BF3 282 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 MTBPQ96DY7 904 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 TTC25Q96NG3 672 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CCDC77Q9BR77 488 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DCUN1D5Q9BTE7 237 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 OSBPL8Q9BZF1 889 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DNAI2Q9GZS0 605 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 HOXD1Q9GZZ0 328 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 CDH7Q9ULB5 785 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PCDHGB4Q9UN71 923 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DNM3Q9UQ16 869 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 PCDHGB5Q9Y5G0 923 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 RLFQ13129 1914 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 DOCK1Q14185 1865 aa6.87□□□□□ -1.31
ZNF540-201ENST00000316433 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 H3BNX3 289 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SMIM22K7EJ46 135 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 M0QX08 132 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 TNPO2O14787 897 aaKnown RBP6.86□□□□□ -1.31
ZNF540-201ENST00000316433 PSTPIP1O43586 416 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 KLHL41O60662 606 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 ENTPD3O75355 529 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 WEE2P0C1S8 567 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SRGAP2CP0DJJ0 459 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SRGAP2BP0DMP2 458 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 GALCP54803 685 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 RRP1BQ14684 758 aaKnown RBP6.86□□□□□ -1.31
ZNF540-201ENST00000316433 STAT4Q14765 748 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 MOGQ16653 247 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 GRAMD1BQ3KR37 738 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 PPP6R3Q5H9R7 873 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-201ENST00000316433 FKBP1CQ5VVH2 108 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 TRIM72Q6ZMU5 477 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 RNF111Q6ZNA4 994 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 IDO2Q6ZQW0 420 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 IFNL1Q8IU54 200 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 TMPRSS6Q8IU80 811 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 CCDC28AQ8IWP9 274 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 ULK2Q8IYT8 1036 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 RASGRP4Q8TDF6 673 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SHC3Q92529 594 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 DHRS4Q9BTZ2 278 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 MTMR12Q9C0I1 747 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 CLPBQ9H078 707 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 NPHS2Q9NP85 383 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SLC7A8Q9UHI5 535 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 DAPK2Q9UIK4 370 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 DTNAQ9Y4J8 743 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 PCDHGB3Q9Y5G1 929 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 FAM172BPA6NC97 362 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 FAM47DPA6NHR8 397 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 J3QRK9 145 aa6.86□□□□□ -1.31
ZNF540-201ENST00000316433 SLC22A1O15245 554 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms