RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FEZF2Q8TBJ5 459 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 CCDC110Q8TBZ0 833 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 TUBGCP5Q96RT8 1024 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 WDR83Q9BRX9 315 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 IRAK4Q9NWZ3 460 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 DRG1Q9Y295 367 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 SCINQ9Y6U3 715 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 HAS3O00219 553 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 MT-ND3P03897 115 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 AKAP5P24588 427 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 ASPAP45381 313 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 BPIFB4P59827 614 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 DYNC1I2Q13409 638 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 ZC3H12AQ5D1E8 599 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 TXNRD3NBQ6F5E7 133 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 ARHGAP22Q7Z5H3 698 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 DRAXINQ8NBI3 349 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 ACAP3Q96P50 834 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 NR1H4Q96RI1 486 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 DHRS4Q9BTZ2 278 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 GCOM2Q9BZD3 368 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
SCAMP4-201ENST00000316097 TRIP12Q14669 1992 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 TGDSO95455 350 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 ANPEPP15144 967 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 RAP1GDS1P52306 607 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 BBS9Q3SYG4 887 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 PALM2Q8IXS6 379 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 CLPTM1LQ96KA5 538 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 CYTH2Q99418 400 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 TTC1Q99614 292 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 FETUBQ9UGM5 382 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 FARP1Q9Y4F1 1045 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 E5RJQ4 531 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 BAG2O95816 211 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 TBXAS1P24557 533 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 AP3M2P53677 418 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 DSG1Q02413 1049 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 SURF1Q15526 300 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 CNPY1Q3B7I2 92 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 RIPOR1Q6ZS17 1223 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF410Q86VK4 478 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 ZNF606Q8WXB4 792 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 TFAP2BQ92481 460 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 PHACTR1Q9C0D0 580 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 NIF3L1Q9GZT8 377 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 SDCBP2Q9H190 292 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 DDX43Q9NXZ2 648 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 SAE1Q9UBE0 346 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 IP6K2Q9UHH9 426 aa17.82■□□□□ 0.44
SCAMP4-201ENST00000316097 hCG_1818297A0A087WSY0 165 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 SMIM35A0A1B0GVV1 85 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CYBAP13498 195 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CCND3P30281 292 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 POLR2BP30876 1174 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 DYNLT1P63172 113 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 TREML1Q86YW5 311 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CPT1BQ92523 772 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 ADPGKQ9BRR6 497 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 NXF3Q9H4D5 531 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 DMAP1Q9NPF5 467 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 KLK14Q9P0G3 267 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 HMGXB4Q9UGU5 601 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 C17orf102A2RUQ5 167 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 USP1O94782 785 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 ITGAVP06756 1048 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 DHRS4L1P0CG22 281 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 DARSP14868 501 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 EIF4BP23588 611 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 ETV4P43268 484 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 GDF10P55107 478 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 SESTD1Q86VW0 696 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CHSY1Q86X52 802 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 PPIL6Q8IXY8 311 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 RBM15BQ8NDT2 890 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 NKD2Q969F2 451 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 AZIN2Q96A70 460 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 SERAC1Q96JX3 654 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 PANX3Q96QZ0 392 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 ECSITQ9BQ95 431 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 RNF39Q9H2S5 420 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 SMYD3Q9H7B4 428 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 PARVAQ9NVD7 372 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 NDE1Q9NXR1 346 aa17.81■□□□□ 0.44
SCAMP4-201ENST00000316097 F8VP50 259 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 MAGEC1O60732 1142 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TRPA1O75762 1119 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 IL18RAPO95256 599 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 KDSRQ06136 332 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 FAM47CQ5HY64 1035 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 TMPRSS6Q8IU80 811 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 SCUBE1Q8IWY4 988 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 UBR7Q8N806 425 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 WNT8BQ93098 351 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 KIF12Q96FN5 646 aa17.8■□□□□ 0.44
SCAMP4-201ENST00000316097 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms