RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 APBB3O95704 486 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 GNA15P30679 374 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 CNR2P34972 360 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 MFAP3P55082 362 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 MIIPQ5JXC2 388 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 LAIR1Q6GTX8 287 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 GRAMD4Q6IC98 578 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 ENOSF1Q7L5Y1 443 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 DENND1CQ8IV53 801 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 SCML4Q8N228 414 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 TXNDC5Q8NBS9 432 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 TSTD1Q8NFU3 115 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 RNF139Q8WU17 664 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 MIS12Q9H081 205 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 SAMSN1Q9NSI8 373 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 OLA1Q9NTK5 396 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
LSM1-201ENST00000311351 AGO1Q9UL18 857 aaKnown RBP17.06■□□□□ 0.32
LSM1-201ENST00000311351 CCDC163A0A0D9SF12 145 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 TBC1D3BA6NDS4 549 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 KCNJ18B7U540 433 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 RPP40O75818 363 aaKnown RBP17.05■□□□□ 0.32
LSM1-201ENST00000311351 PNMA6AP0CW24 399 aaPredicted RBP17.05■□□□□ 0.32
LSM1-201ENST00000311351 USP8P40818 1118 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 GPD2P43304 727 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
LSM1-201ENST00000311351 KCNJ12Q14500 433 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 ANO7Q6IWH7 933 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 TMEM92Q6UXU6 159 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 GAB3Q8WWW8 586 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 SHC3Q92529 594 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 PLD4Q96BZ4 506 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
LSM1-201ENST00000311351 TUBGCP2Q9BSJ2 902 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 TPSD1Q9BZJ3 242 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 DCLK3Q9C098 648 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 NDST4Q9H3R1 872 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 PARD6AQ9NPB6 346 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 ST7Q9NRC1 585 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 ABCC13Q9NSE7 274 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 CYTH4Q9UIA0 394 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 HCN2Q9UL51 889 aa17.05■□□□□ 0.32
LSM1-201ENST00000311351 A0A0A0MRY4 1105 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 ADAM23O75077 832 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 LTFP02788 710 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 TNFRSF4P43489 277 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 DGKEP52429 567 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 TRIP4Q15650 581 aaPredicted RBP17.04■□□□□ 0.32
LSM1-201ENST00000311351 CRY1Q16526 586 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 FYB2Q5VWT5 728 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 RBM43Q6ZSC3 357 aaKnown RBP17.04■□□□□ 0.32
LSM1-201ENST00000311351 FAM160A2Q8N612 972 aaPredicted RBP17.04■□□□□ 0.32
LSM1-201ENST00000311351 ZNF606Q8WXB4 792 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 IRGQQ8WZA9 623 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 HSFY1Q96LI6 401 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 ZNF510Q9Y2H8 683 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
LSM1-201ENST00000311351 PRRT4C9JH25 899 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
LSM1-201ENST00000311351 MED7O43513 233 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 PENKP01210 267 aaPredicted RBP17.03■□□□□ 0.32
LSM1-201ENST00000311351 WASP42768 502 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 DGKGP49619 791 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 SPEM2Q0P670 501 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 EGFLAMQ63HQ2 1017 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 MSANTD2Q6P1R3 559 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 KBTBD6Q86V97 674 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
LSM1-201ENST00000311351 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 FAM81BQ96LP2 452 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 TAB2Q9NYJ8 693 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 TJP2Q9UDY2 1190 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
LSM1-201ENST00000311351 HBS1LQ9Y450 684 aaKnown RBP17.03■□□□□ 0.32
LSM1-201ENST00000311351 DCHS1Q96JQ0 3298 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 ABCA7Q8IZY2 2146 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 E5RJQ4 531 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 DCLK1O15075 740 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 FBXO21O94952 628 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 RETP07949 1114 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 CISD3P0C7P0 127 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 TGM1P22735 817 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 CHKAP35790 457 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 RPL34P49207 117 aaKnown RBP17.02■□□□□ 0.32
LSM1-201ENST00000311351 MEA1Q16626 185 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 PREPLQ4J6C6 727 aaPredicted RBP17.02■□□□□ 0.32
LSM1-201ENST00000311351 EOGTQ5NDL2 527 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 DPY19L2P1Q6NXN4 242 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.32
LSM1-201ENST00000311351 RASSF3Q86WH2 238 aa17.02■□□□□ 0.32
LSM1-201ENST00000311351 PASD1Q8IV76 773 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms