RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CTU1Q7Z7A3 348 aaKnown RBP19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 PALM2Q8IXS6 379 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 NAT8LQ8N9F0 302 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 APOPT1Q96IL0 206 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 SHCBP1LQ9BZQ2 653 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 HAPLN2Q9GZV7 340 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 PORCNQ9H237 461 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 ZNF232Q9UNY5 417 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 KCNH4Q9UQ05 1017 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 WDR81Q562E7 1941 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 CCDC166P0CW27 439 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 RGS2P41220 211 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 BAATQ14032 418 aaPredicted RBP19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 NADK2Q4G0N4 442 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 B3GNT6Q6ZMB0 384 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 CCDC60Q8IWA6 550 aaPredicted RBP19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 CPT1BQ92523 772 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 MSTO1Q9BUK6 570 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 RNF146Q9NTX7 359 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 KCNK4Q9NYG8 393 aa19.54■□□□□ 0.72
HERPUD2-201ENST00000311350 ASS1P00966 412 aaKnown RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 PTPRAP18433 802 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 EIF4BP23588 611 aaKnown RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ARL2P36404 184 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 OAZ1P54368 228 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 NRLP54845 237 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ACTR2P61160 394 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 FOLH1Q04609 750 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 DNAL1Q4LDG9 190 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 EFHC1Q5JVL4 640 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 DCUN1D2Q6PH85 259 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 NSUN6Q8TEA1 469 aaKnown RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 RILPQ96NA2 401 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 MCEEQ96PE7 176 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 C3orf70A6NLC5 250 aaPredicted RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 SUPT20HL2P0C7V6 817 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ATP6V1B1P15313 513 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ADARP55265 1226 aaKnown RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 GK3PQ14409 553 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 TLR1Q15399 786 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ANKRD20A4Q4UJ75 823 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 BBS12Q6ZW61 710 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 TRIM42Q8IWZ5 723 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 ZFP28Q8NHY6 868 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 FNIP1Q8TF40 1166 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 GRIP2Q9C0E4 1043 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 UBAP1Q9NZ09 502 aa19.53■□□□□ 0.72
HERPUD2-201ENST00000311350 CAPN8A6NHC0 703 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 BTBD19C9JJ37 291 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 F8VP50 259 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 VWA5AO00534 786 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 HNRNPCP07910 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 KRT7P08729 469 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 EMP3P54852 163 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 DYNLT1P63172 113 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 TMPRSS15P98073 1019 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 OGDHQ02218 1023 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 PLOD1Q02809 727 aaPredicted RBP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 BTKQ06187 659 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 HIC1Q14526 733 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 TAF1CQ15572 869 aaPredicted RBP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 KYAT3Q6YP21 454 aaKnown RBP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 WDR49Q8IV35 697 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 BRSK2Q8IWQ3 736 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 THNSL1Q8IYQ7 743 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 DEPTORQ8TB45 409 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 K7ERI5 159 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 TMEM63AO94886 807 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 MYLK3Q32MK0 819 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 GRAMD1BQ3KR37 738 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 SH2D4BQ5SQS7 431 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 TMC7Q7Z402 723 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 CEP70Q8NHQ1 597 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 SRPK1Q96SB4 655 aaKnown RBP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 HEMK1Q9Y5R4 338 aaPredicted RBP19.52■□□□□ 0.72
HERPUD2-201ENST00000311350 CXCL11O14625 94 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 PEX6Q13608 980 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 KBTBD12Q3ZCT8 623 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 TMEM259Q4ZIN3 620 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 ADGRG6Q86SQ4 1221 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 OR5B17Q8NGF7 314 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 CYP4F11Q9HBI6 524 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 ZFYVE28Q9HCC9 887 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 SPATA31C2B4DYI2 1134 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 RGS20O76081 388 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 RAG1P15918 1043 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 FUT4P22083 530 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 SERPINB6P35237 376 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 ZNF200P98182 395 aaPredicted RBP19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 SLC18A2Q05940 514 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 CHI3L2Q15782 390 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 MTERF2Q49AM1 385 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 AAGABQ6PD74 315 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 C1orf228Q6PIY5 440 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 ZCCHC23Q6ZST2 131 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 GAB3Q8WWW8 586 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 EPB41L1Q9H4G0 881 aa19.51■□□□□ 0.71
HERPUD2-201ENST00000311350 RPAP3Q9H6T3 665 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms