RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ALDH1A3P47895 512 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ROR1Q01973 937 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 DPYSL3Q14195 570 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 LRRC45Q96CN5 670 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 FERMT1Q9BQL6 677 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 MTIF3Q9H2K0 278 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 LRRC19Q9H756 370 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 MRPL17Q9NRX2 175 aaKnown RBP11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ABCC13Q9NSE7 274 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 ZNF446Q9NWS9 450 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 GMIPQ9P107 970 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 TTLL3Q9Y4R7 772 aa11.56□□□□□ -0.56
TRIM59-201ENST00000309784 SMIM23A6NLE4 172 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 F9P00740 461 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 ZSCAN5DPP0CG00 497 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 FGFR3P22607 806 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 LMAN1P49257 510 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 TAF10Q12962 218 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 VEPH1Q14D04 833 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 ANKRD20A8PQ5CZ79 823 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 FAM71DQ8N9W8 422 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 RNF157Q96PX1 679 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 GOLGA6BA6NDN3 693 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 LPXNO60711 386 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 ETS1P14921 441 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 EPHB2P29323 1055 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 GPR17Q13304 367 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 P3H1Q32P28 736 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 TAC4Q86UU9 113 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 GDF3Q9NR23 364 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 PCYOX1Q9UHG3 505 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 PDCD11Q14690 1871 aaKnown RBP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 GOLGA6L10A6NI86 522 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 GOLGA8MH3BSY2 632 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 KCNN4O15554 427 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 ADAM12O43184 909 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 LIASO43766 372 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 PECAM1P16284 738 aaPredicted RBP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 SCNN1AP37088 669 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 RPL21P46778 160 aaKnown RBP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 MTM1Q13496 603 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 BBS12Q6ZW61 710 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
TRIM59-201ENST00000309784 ENTPD7Q9NQZ7 604 aa11.55□□□□□ -0.56
TRIM59-201ENST00000309784 CTNNB1P35222 781 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 NUMBP49757 651 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 VCPP55072 806 aaKnown RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 RSPO2Q6UXX9 243 aaPredicted RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 HNRNPLLQ8WVV9 542 aaKnown RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 KCTD15Q96SI1 283 aaPredicted RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 EPAS1Q99814 870 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 SNX10Q9Y5X0 201 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 APOC4-APOC2K7ER74 178 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 APOC2P02655 101 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 AP1B1Q10567 949 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 SNF8Q96H20 258 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 NPY6RQ99463 290 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 TLR8Q9NR97 1041 aaKnown RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 WDR27A2RRH5 827 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 E7EVH7 732 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 APOEP02649 317 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 SOD2P04179 222 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 PPM1AP35813 382 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 MON1AQ86VX9 555 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 COLGALT1Q8NBJ5 622 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 TEKT4Q8WW24 435 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 CWH43Q9H720 699 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
TRIM59-201ENST00000309784 CXXC1Q9P0U4 656 aaPredicted RBP11.54□□□□□ -0.56
TRIM59-201ENST00000309784 TLDC2A0PJX2 215 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
TRIM59-201ENST00000309784 TBX18O95935 607 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 RARGP13631 454 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 ATP2A2P16615 1042 aaKnown RBP11.53□□□□□ -0.56
TRIM59-201ENST00000309784 ADRA1BP35368 520 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 USP46P62068 366 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
TRIM59-201ENST00000309784 PLD1Q13393 1074 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 SIX1Q15475 284 aaPredicted RBP11.53□□□□□ -0.56
TRIM59-201ENST00000309784 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
TRIM59-201ENST00000309784 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 IRGQQ8WZA9 623 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 RUBCNQ92622 972 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 FUT8Q9BYC5 575 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 SLC12A6Q9UHW9 1150 aa11.53□□□□□ -0.56
TRIM59-201ENST00000309784 SLC12A8A0AV02 714 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms