RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 KIAA0895Q8NCT3 520 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 STAMBPL1Q96FJ0 436 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 NMRK1Q9NWW6 199 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 CLTBP09497 229 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 NPR3P17342 541 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 NOL9Q5SY16 702 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GPR158Q5T848 1215 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 E4F1Q66K89 784 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 GLT6D1Q7Z4J2 308 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 KLHL29Q96CT2 875 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 RASSF4Q9H2L5 321 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 MRPL40Q9NQ50 206 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 STX18Q9P2W9 335 aaKnown RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 UBA2Q9UBT2 640 aaPredicted RBP11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 APPL1Q9UKG1 709 aa11.03□□□□□ -0.64
SYNPO2-201ENST00000307142 TISP43B9A030 160 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 TNFSF9P41273 254 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 HALP42357 657 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 DUSP4Q13115 394 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 MYBPC2Q14324 1141 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 UGCGQ16739 394 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 USP45Q70EL2 814 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 JADE3Q92613 823 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 SPACA7Q96KW9 195 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 BBS2Q9BXC9 721 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 GYG2O15488 501 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 CENPAP49450 140 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 MARSP56192 900 aaKnown RBP11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 MROH9Q5TGP6 573 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 COG1Q8WTW3 980 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 C9orf72Q96LT7 481 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 NLNQ9BYT8 704 aa11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 ZCCHC2Q9C0B9 1178 aaKnown RBP11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 IARS2Q9NSE4 1012 aaKnown RBP11.02□□□□□ -0.64
SYNPO2-201ENST00000307142 LBX1P52954 281 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 ILDR2Q71H61 639 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 PTAR1Q7Z6K3 402 aaPredicted RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 KCNB2Q92953 911 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 USP27XA6NNY8 438 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 DARSP14868 501 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CCND3P30281 292 aaPredicted RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CDC25CP30307 473 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 ABCE1P61221 599 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 NFIL3Q16649 462 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CHPFQ8IZ52 775 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 SMG7Q92540 1137 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 C18orf25Q96B23 403 aaPredicted RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CEP41Q9BYV8 373 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 HPS4Q9NQG7 708 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 TFR2Q9UP52 801 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CLDN5O00501 218 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 NCAM2O15394 837 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 B4GALT5O43286 388 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 PAEPP09466 180 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 GGCXP38435 758 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 FAR2Q96K12 515 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM47E-STBD1D6RA91 191 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 C1QTNF3-AMACRE9PGA6 284 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 CHKAP35790 457 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 SLC6A3Q01959 620 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 GBP5Q96PP8 586 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 DTNAQ9Y4J8 743 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 CYP3A7-CYP3A51PA0A087WV96 503 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 LGR5O75473 907 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 CYP3A7P24462 503 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 OTUD4Q01804 1114 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 COLGALT1Q8NBJ5 622 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 RUVBL2Q9Y230 463 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 GPSM3Q9Y4H4 160 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 A0A0A6YYK5 440 aaPredicted RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 KRT4P19013 534 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 HDAC4P56524 1084 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 PTENP60484 403 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 MAPRE2Q15555 327 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 RARS2Q5T160 578 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 C1orf186Q6ZWK4 172 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 RIPOR3Q96MK2 946 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 FRMD8P1Q9BZ68 369 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms